Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.08■■□□□ 1.29
PDGFBP01127 AC016769.1-201ENST00000409132 1010 ntBASIC23.08■■□□□ 1.29
PDGFBP01127 AC137761.2-201ENST00000561729 223 ntBASIC23.08■■□□□ 1.29
PDGFBP01127 AC145350.3-201ENST00000569033 163 ntBASIC23.08■■□□□ 1.29
PDGFBP01127 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.08■■□□□ 1.29
PDGFBP01127 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDGFBP01127 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
PDGFBP01127 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDGFBP01127 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.08■■□□□ 1.28
PDGFBP01127 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDGFBP01127 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDGFBP01127 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDGFBP01127 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
PDGFBP01127 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDGFBP01127 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.07■■□□□ 1.28
PDGFBP01127 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PDGFBP01127 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
PDGFBP01127 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.07■■□□□ 1.28
PDGFBP01127 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDGFBP01127 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDGFBP01127 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDGFBP01127 AP005435.1-201ENST00000529293 1178 ntBASIC23.06■■□□□ 1.28
PDGFBP01127 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PDGFBP01127 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDGFBP01127 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
PDGFBP01127 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
PDGFBP01127 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDGFBP01127 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PDGFBP01127 CROCCP5-201ENST00000436658 830 ntBASIC23.05■■□□□ 1.28
PDGFBP01127 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.05■■□□□ 1.28
PDGFBP01127 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.05■■□□□ 1.28
PDGFBP01127 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDGFBP01127 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
PDGFBP01127 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDGFBP01127 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
PDGFBP01127 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.04■■□□□ 1.28
PDGFBP01127 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.04■■□□□ 1.28
PDGFBP01127 AC006970.2-201ENST00000450065 779 ntBASIC23.04■■□□□ 1.28
PDGFBP01127 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.04■■□□□ 1.28
PDGFBP01127 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
PDGFBP01127 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
PDGFBP01127 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDGFBP01127 TSPY20P-201ENST00000450910 630 ntBASIC23.03■■□□□ 1.28
PDGFBP01127 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.03■■□□□ 1.28
PDGFBP01127 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDGFBP01127 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDGFBP01127 AL022069.1-201ENST00000568025 1636 ntBASIC23.03■■□□□ 1.28
PDGFBP01127 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDGFBP01127 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDGFBP01127 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDGFBP01127 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.02■■□□□ 1.28
PDGFBP01127 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.02■■□□□ 1.28
PDGFBP01127 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDGFBP01127 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
PDGFBP01127 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.02■■□□□ 1.28
PDGFBP01127 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDGFBP01127 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.02■■□□□ 1.28
PDGFBP01127 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDGFBP01127 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PDGFBP01127 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDGFBP01127 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
PDGFBP01127 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.01■■□□□ 1.27
PDGFBP01127 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PDGFBP01127 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.01■■□□□ 1.27
PDGFBP01127 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDGFBP01127 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDGFBP01127 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDGFBP01127 CD99P1-205ENST00000527459 561 ntBASIC23.01■■□□□ 1.27
PDGFBP01127 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.01■■□□□ 1.27
PDGFBP01127 AC010525.1-201ENST00000585559 441 ntBASIC23.01■■□□□ 1.27
PDGFBP01127 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDGFBP01127 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDGFBP01127 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDGFBP01127 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDGFBP01127 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.01■■□□□ 1.27
PDGFBP01127 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDGFBP01127 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PDGFBP01127 AC091060.1-201ENST00000623524 1766 ntBASIC23■■□□□ 1.27
PDGFBP01127 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDGFBP01127 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDGFBP01127 DBI-210ENST00000542275 757 ntTSL 5 BASIC23■■□□□ 1.27
PDGFBP01127 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23■■□□□ 1.27
PDGFBP01127 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDGFBP01127 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23■■□□□ 1.27
PDGFBP01127 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
PDGFBP01127 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PDGFBP01127 GAS2L1P2-201ENST00000436355 1356 ntBASIC23■■□□□ 1.27
PDGFBP01127 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDGFBP01127 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
PDGFBP01127 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.99■■□□□ 1.27
PDGFBP01127 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDGFBP01127 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.99■■□□□ 1.27
PDGFBP01127 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PDGFBP01127 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.99■■□□□ 1.27
PDGFBP01127 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PDGFBP01127 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDGFBP01127 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.99■■□□□ 1.27
PDGFBP01127 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDGFBP01127 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.98■■□□□ 1.27
PDGFBP01127 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms