Protein–RNA interactions for Protein: O75436

VPS26A, Vacuolar protein sorting-associated protein 26A, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26AO75436 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS26AO75436 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
VPS26AO75436 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
VPS26AO75436 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
VPS26AO75436 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.34■■□□□ 1.17
VPS26AO75436 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
VPS26AO75436 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS26AO75436 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
VPS26AO75436 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS26AO75436 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS26AO75436 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.34■■□□□ 1.17
VPS26AO75436 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.34■■□□□ 1.17
VPS26AO75436 KRT125P-201ENST00000546827 989 ntBASIC22.34■■□□□ 1.17
VPS26AO75436 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VPS26AO75436 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VPS26AO75436 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.34■■□□□ 1.17
VPS26AO75436 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS26AO75436 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VPS26AO75436 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS26AO75436 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.33■■□□□ 1.17
VPS26AO75436 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
VPS26AO75436 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.33■■□□□ 1.17
VPS26AO75436 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.33■■□□□ 1.17
VPS26AO75436 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VPS26AO75436 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VPS26AO75436 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
VPS26AO75436 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
VPS26AO75436 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.33■■□□□ 1.17
VPS26AO75436 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.33■■□□□ 1.17
VPS26AO75436 Z92544.1-202ENST00000571933 1220 ntBASIC22.33■■□□□ 1.17
VPS26AO75436 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
VPS26AO75436 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.33■■□□□ 1.16
VPS26AO75436 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS26AO75436 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
VPS26AO75436 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
VPS26AO75436 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.32■■□□□ 1.16
VPS26AO75436 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VPS26AO75436 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
VPS26AO75436 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VPS26AO75436 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.32■■□□□ 1.16
VPS26AO75436 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VPS26AO75436 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VPS26AO75436 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VPS26AO75436 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS26AO75436 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.31■■□□□ 1.16
VPS26AO75436 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
VPS26AO75436 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS26AO75436 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VPS26AO75436 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS26AO75436 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS26AO75436 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
VPS26AO75436 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.31■■□□□ 1.16
VPS26AO75436 MIR6722-201ENST00000617286 78 ntBASIC22.31■■□□□ 1.16
VPS26AO75436 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.31■■□□□ 1.16
VPS26AO75436 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VPS26AO75436 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.31■■□□□ 1.16
VPS26AO75436 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.31■■□□□ 1.16
VPS26AO75436 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VPS26AO75436 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS26AO75436 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS26AO75436 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VPS26AO75436 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VPS26AO75436 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS26AO75436 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS26AO75436 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.3■■□□□ 1.16
VPS26AO75436 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.3■■□□□ 1.16
VPS26AO75436 DUSP8P3-201ENST00000399571 1760 ntBASIC22.3■■□□□ 1.16
VPS26AO75436 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
VPS26AO75436 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS26AO75436 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS26AO75436 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VPS26AO75436 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS26AO75436 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
VPS26AO75436 AC068473.5-201ENST00000616428 2072 ntBASIC22.29■■□□□ 1.16
VPS26AO75436 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS26AO75436 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.29■■□□□ 1.16
VPS26AO75436 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.29■■□□□ 1.16
VPS26AO75436 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.29■■□□□ 1.16
VPS26AO75436 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.29■■□□□ 1.16
VPS26AO75436 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS26AO75436 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
VPS26AO75436 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.29■■□□□ 1.16
VPS26AO75436 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.28■■□□□ 1.16
VPS26AO75436 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS26AO75436 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.28■■□□□ 1.16
VPS26AO75436 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.28■■□□□ 1.16
VPS26AO75436 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
VPS26AO75436 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
VPS26AO75436 AC092028.1-203ENST00000608262 953 ntBASIC22.28■■□□□ 1.16
VPS26AO75436 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.28■■□□□ 1.16
VPS26AO75436 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.28■■□□□ 1.16
VPS26AO75436 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
VPS26AO75436 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
VPS26AO75436 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
VPS26AO75436 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS26AO75436 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
VPS26AO75436 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS26AO75436 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.27■■□□□ 1.16
VPS26AO75436 AC239859.2-201ENST00000444165 318 ntBASIC22.27■■□□□ 1.16
VPS26AO75436 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms