Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
NPHP4O75161 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
NPHP4O75161 NT5C3AP1-201ENST00000394500 1012 ntBASIC32.47■■■□□ 2.79
NPHP4O75161 AC016769.1-201ENST00000409132 1010 ntBASIC32.47■■■□□ 2.79
NPHP4O75161 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC32.47■■■□□ 2.79
NPHP4O75161 AL022069.1-201ENST00000568025 1636 ntBASIC32.47■■■□□ 2.79
NPHP4O75161 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC32.47■■■□□ 2.79
NPHP4O75161 ERN1-208ENST00000606895 2068 ntBASIC32.46■■■□□ 2.79
NPHP4O75161 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
NPHP4O75161 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
NPHP4O75161 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
NPHP4O75161 AC137761.2-201ENST00000561729 223 ntBASIC32.46■■■□□ 2.79
NPHP4O75161 AC145350.3-201ENST00000569033 163 ntBASIC32.46■■■□□ 2.79
NPHP4O75161 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC32.46■■■□□ 2.79
NPHP4O75161 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
NPHP4O75161 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
NPHP4O75161 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC32.45■■■□□ 2.79
NPHP4O75161 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC32.45■■■□□ 2.79
NPHP4O75161 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.79
NPHP4O75161 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
NPHP4O75161 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC32.45■■■□□ 2.79
NPHP4O75161 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC32.45■■■□□ 2.79
NPHP4O75161 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC32.45■■■□□ 2.79
NPHP4O75161 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC32.45■■■□□ 2.78
NPHP4O75161 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC32.45■■■□□ 2.78
NPHP4O75161 CROCCP5-201ENST00000436658 830 ntBASIC32.44■■■□□ 2.78
NPHP4O75161 AL109923.1-201ENST00000618799 583 ntBASIC32.44■■■□□ 2.78
NPHP4O75161 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC32.44■■■□□ 2.78
NPHP4O75161 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
NPHP4O75161 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
NPHP4O75161 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
NPHP4O75161 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
NPHP4O75161 HSCB-202ENST00000398941 955 ntTSL 2 BASIC32.43■■■□□ 2.78
NPHP4O75161 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
NPHP4O75161 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
NPHP4O75161 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
NPHP4O75161 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC32.42■■■□□ 2.78
NPHP4O75161 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
NPHP4O75161 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC32.42■■■□□ 2.78
NPHP4O75161 AP005435.1-201ENST00000529293 1178 ntBASIC32.42■■■□□ 2.78
NPHP4O75161 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
NPHP4O75161 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
NPHP4O75161 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
NPHP4O75161 AC006970.2-201ENST00000450065 779 ntBASIC32.41■■■□□ 2.78
NPHP4O75161 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
NPHP4O75161 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC32.41■■■□□ 2.78
NPHP4O75161 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC32.41■■■□□ 2.78
NPHP4O75161 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
NPHP4O75161 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
NPHP4O75161 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
NPHP4O75161 STX7-201ENST00000367937 1090 ntTSL 5 BASIC32.4■■■□□ 2.78
NPHP4O75161 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC32.4■■■□□ 2.78
NPHP4O75161 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
NPHP4O75161 MPST-204ENST00000404393 1329 ntTSL 5 BASIC32.4■■■□□ 2.78
NPHP4O75161 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC32.4■■■□□ 2.78
NPHP4O75161 DBI-210ENST00000542275 757 ntTSL 5 BASIC32.4■■■□□ 2.78
NPHP4O75161 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
NPHP4O75161 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
NPHP4O75161 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC32.39■■■□□ 2.78
NPHP4O75161 LHPP-203ENST00000392757 840 ntTSL 3 BASIC32.39■■■□□ 2.78
NPHP4O75161 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC32.39■■■□□ 2.78
NPHP4O75161 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC32.39■■■□□ 2.78
NPHP4O75161 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
NPHP4O75161 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
NPHP4O75161 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
NPHP4O75161 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC32.38■■■□□ 2.77
NPHP4O75161 AC141586.4-201ENST00000624558 1573 ntBASIC32.38■■■□□ 2.77
NPHP4O75161 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC32.38■■■□□ 2.77
NPHP4O75161 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
NPHP4O75161 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC32.38■■■□□ 2.77
NPHP4O75161 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC32.38■■■□□ 2.77
NPHP4O75161 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC32.38■■■□□ 2.77
NPHP4O75161 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
NPHP4O75161 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
NPHP4O75161 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
NPHP4O75161 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
NPHP4O75161 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
NPHP4O75161 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC32.38■■■□□ 2.77
NPHP4O75161 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC32.37■■■□□ 2.77
NPHP4O75161 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
NPHP4O75161 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
NPHP4O75161 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
NPHP4O75161 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC32.37■■■□□ 2.77
NPHP4O75161 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC32.37■■■□□ 2.77
NPHP4O75161 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
NPHP4O75161 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
NPHP4O75161 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
NPHP4O75161 NCF1B-203ENST00000435988 1254 ntBASIC32.36■■■□□ 2.77
NPHP4O75161 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC32.36■■■□□ 2.77
NPHP4O75161 GALNS-213ENST00000569433 723 ntTSL 3 BASIC32.36■■■□□ 2.77
NPHP4O75161 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
NPHP4O75161 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
NPHP4O75161 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC32.35■■■□□ 2.77
NPHP4O75161 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
NPHP4O75161 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
NPHP4O75161 AC010525.1-201ENST00000585559 441 ntBASIC32.35■■■□□ 2.77
NPHP4O75161 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC32.35■■■□□ 2.77
NPHP4O75161 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
NPHP4O75161 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC32.34■■■□□ 2.77
NPHP4O75161 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC32.34■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms