Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD2O60906 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD2O60906 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SMPD2O60906 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SMPD2O60906 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.74■□□□□ 0.75
SMPD2O60906 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMPD2O60906 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMPD2O60906 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMPD2O60906 AC105265.2-201ENST00000467189 838 ntBASIC19.73■□□□□ 0.75
SMPD2O60906 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
SMPD2O60906 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMPD2O60906 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
SMPD2O60906 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMPD2O60906 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMPD2O60906 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMPD2O60906 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMPD2O60906 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.72■□□□□ 0.75
SMPD2O60906 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.72■□□□□ 0.75
SMPD2O60906 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMPD2O60906 ALDH1A3-203ENST00000557963 1670 ntBASIC19.72■□□□□ 0.75
SMPD2O60906 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMPD2O60906 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SMPD2O60906 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SMPD2O60906 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SMPD2O60906 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.72■□□□□ 0.75
SMPD2O60906 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.72■□□□□ 0.75
SMPD2O60906 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMPD2O60906 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.72■□□□□ 0.75
SMPD2O60906 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMPD2O60906 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMPD2O60906 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMPD2O60906 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMPD2O60906 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.71■□□□□ 0.75
SMPD2O60906 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMPD2O60906 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SMPD2O60906 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.71■□□□□ 0.75
SMPD2O60906 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SMPD2O60906 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMPD2O60906 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMPD2O60906 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMPD2O60906 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.7■□□□□ 0.74
SMPD2O60906 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD2O60906 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD2O60906 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.7■□□□□ 0.74
SMPD2O60906 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.7■□□□□ 0.74
SMPD2O60906 AF213884.3-201ENST00000563833 479 ntBASIC19.7■□□□□ 0.74
SMPD2O60906 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD2O60906 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD2O60906 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD2O60906 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD2O60906 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.7■□□□□ 0.74
SMPD2O60906 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.7■□□□□ 0.74
SMPD2O60906 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMPD2O60906 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.69■□□□□ 0.74
SMPD2O60906 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD2O60906 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.69■□□□□ 0.74
SMPD2O60906 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD2O60906 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD2O60906 ABCB10P4-201ENST00000566803 2184 ntBASIC19.69■□□□□ 0.74
SMPD2O60906 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD2O60906 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMPD2O60906 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.69■□□□□ 0.74
SMPD2O60906 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD2O60906 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD2O60906 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.68■□□□□ 0.74
SMPD2O60906 AC092171.4-201ENST00000609130 632 ntBASIC19.68■□□□□ 0.74
SMPD2O60906 AL136967.2-201ENST00000623968 743 ntBASIC19.68■□□□□ 0.74
SMPD2O60906 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.68■□□□□ 0.74
SMPD2O60906 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SMPD2O60906 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD2O60906 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD2O60906 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD2O60906 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD2O60906 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD2O60906 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMPD2O60906 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SMPD2O60906 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.68■□□□□ 0.74
SMPD2O60906 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD2O60906 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SMPD2O60906 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD2O60906 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD2O60906 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD2O60906 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.67■□□□□ 0.74
SMPD2O60906 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.67■□□□□ 0.74
SMPD2O60906 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SMPD2O60906 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD2O60906 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.67■□□□□ 0.74
SMPD2O60906 AC005703.6-201ENST00000623265 1329 ntBASIC19.67■□□□□ 0.74
SMPD2O60906 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD2O60906 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD2O60906 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMPD2O60906 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMPD2O60906 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMPD2O60906 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMPD2O60906 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMPD2O60906 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMPD2O60906 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMPD2O60906 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.66■□□□□ 0.74
SMPD2O60906 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.66■□□□□ 0.74
SMPD2O60906 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms