Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 PVT1_1.1-201ENST00000615125 194 ntBASIC22.19■■□□□ 1.14
DLX3O60479 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
DLX3O60479 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
DLX3O60479 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DLX3O60479 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.19■■□□□ 1.14
DLX3O60479 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DLX3O60479 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
DLX3O60479 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
DLX3O60479 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
DLX3O60479 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
DLX3O60479 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DLX3O60479 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DLX3O60479 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DLX3O60479 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.18■■□□□ 1.14
DLX3O60479 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DLX3O60479 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DLX3O60479 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DLX3O60479 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.17■■□□□ 1.14
DLX3O60479 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
DLX3O60479 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.17■■□□□ 1.14
DLX3O60479 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DLX3O60479 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
DLX3O60479 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DLX3O60479 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.17■■□□□ 1.14
DLX3O60479 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
DLX3O60479 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DLX3O60479 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DLX3O60479 AC004987.1-201ENST00000428627 508 ntBASIC22.16■■□□□ 1.14
DLX3O60479 BHLHE23-202ENST00000612929 1109 ntBASIC22.16■■□□□ 1.14
DLX3O60479 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DLX3O60479 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.16■■□□□ 1.14
DLX3O60479 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DLX3O60479 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DLX3O60479 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
DLX3O60479 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
DLX3O60479 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DLX3O60479 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.15■■□□□ 1.14
DLX3O60479 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DLX3O60479 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DLX3O60479 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DLX3O60479 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.15■■□□□ 1.14
DLX3O60479 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
DLX3O60479 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
DLX3O60479 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.14■■□□□ 1.14
DLX3O60479 KRT18P24-201ENST00000344739 1156 ntBASIC22.14■■□□□ 1.13
DLX3O60479 ATP5G2P3-201ENST00000429083 425 ntBASIC22.14■■□□□ 1.13
DLX3O60479 MIR4281-201ENST00000580852 62 ntBASIC22.14■■□□□ 1.13
DLX3O60479 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
DLX3O60479 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
DLX3O60479 AC079630.1-202ENST00000618127 1840 ntBASIC22.14■■□□□ 1.13
DLX3O60479 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.14■■□□□ 1.13
DLX3O60479 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
DLX3O60479 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
DLX3O60479 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
DLX3O60479 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.14■■□□□ 1.13
DLX3O60479 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.14■■□□□ 1.13
DLX3O60479 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.14■■□□□ 1.13
DLX3O60479 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
DLX3O60479 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
DLX3O60479 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
DLX3O60479 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.13■■□□□ 1.13
DLX3O60479 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
DLX3O60479 GUSBP5-202ENST00000510805 1989 ntBASIC22.13■■□□□ 1.13
DLX3O60479 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.13■■□□□ 1.13
DLX3O60479 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DLX3O60479 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.13■■□□□ 1.13
DLX3O60479 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DLX3O60479 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.12■■□□□ 1.13
DLX3O60479 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DLX3O60479 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DLX3O60479 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DLX3O60479 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.12■■□□□ 1.13
DLX3O60479 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
DLX3O60479 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DLX3O60479 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DLX3O60479 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.12■■□□□ 1.13
DLX3O60479 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
DLX3O60479 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DLX3O60479 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.12■■□□□ 1.13
DLX3O60479 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.12■■□□□ 1.13
DLX3O60479 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DLX3O60479 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DLX3O60479 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DLX3O60479 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.11■■□□□ 1.13
DLX3O60479 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.11■■□□□ 1.13
DLX3O60479 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.11■■□□□ 1.13
DLX3O60479 THA1P-201ENST00000590384 1145 ntBASIC22.11■■□□□ 1.13
DLX3O60479 AC074183.2-201ENST00000623112 922 ntBASIC22.11■■□□□ 1.13
DLX3O60479 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
DLX3O60479 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DLX3O60479 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
DLX3O60479 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DLX3O60479 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DLX3O60479 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.1■■□□□ 1.13
DLX3O60479 AC004448.1-201ENST00000458332 883 ntBASIC22.1■■□□□ 1.13
DLX3O60479 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.1■■□□□ 1.13
DLX3O60479 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
DLX3O60479 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DLX3O60479 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
DLX3O60479 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms