Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.81■□□□□ 0.6
NDUFB3O43676 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFB3O43676 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFB3O43676 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.81■□□□□ 0.6
NDUFB3O43676 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFB3O43676 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFB3O43676 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NDUFB3O43676 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFB3O43676 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFB3O43676 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NDUFB3O43676 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.8■□□□□ 0.6
NDUFB3O43676 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFB3O43676 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.8■□□□□ 0.6
NDUFB3O43676 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.8■□□□□ 0.6
NDUFB3O43676 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.8■□□□□ 0.6
NDUFB3O43676 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.8■□□□□ 0.6
NDUFB3O43676 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFB3O43676 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFB3O43676 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFB3O43676 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFB3O43676 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFB3O43676 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFB3O43676 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFB3O43676 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.79■□□□□ 0.6
NDUFB3O43676 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.79■□□□□ 0.6
NDUFB3O43676 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.79■□□□□ 0.6
NDUFB3O43676 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.79■□□□□ 0.6
NDUFB3O43676 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFB3O43676 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFB3O43676 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFB3O43676 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFB3O43676 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.79■□□□□ 0.6
NDUFB3O43676 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFB3O43676 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFB3O43676 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.78■□□□□ 0.6
NDUFB3O43676 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NDUFB3O43676 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.78■□□□□ 0.6
NDUFB3O43676 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
NDUFB3O43676 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.78■□□□□ 0.6
NDUFB3O43676 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFB3O43676 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFB3O43676 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFB3O43676 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NDUFB3O43676 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFB3O43676 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.77■□□□□ 0.6
NDUFB3O43676 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.77■□□□□ 0.6
NDUFB3O43676 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.77■□□□□ 0.6
NDUFB3O43676 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NDUFB3O43676 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFB3O43676 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFB3O43676 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFB3O43676 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFB3O43676 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NDUFB3O43676 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NDUFB3O43676 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDUFB3O43676 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDUFB3O43676 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.76■□□□□ 0.59
NDUFB3O43676 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NDUFB3O43676 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NDUFB3O43676 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NDUFB3O43676 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDUFB3O43676 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NDUFB3O43676 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NDUFB3O43676 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NDUFB3O43676 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NDUFB3O43676 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NDUFB3O43676 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NDUFB3O43676 AC009102.2-201ENST00000606772 1639 ntBASIC18.75■□□□□ 0.59
NDUFB3O43676 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.75■□□□□ 0.59
NDUFB3O43676 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.75■□□□□ 0.59
NDUFB3O43676 AC008406.3-201ENST00000620001 1374 ntBASIC18.75■□□□□ 0.59
NDUFB3O43676 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NDUFB3O43676 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NDUFB3O43676 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NDUFB3O43676 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NDUFB3O43676 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NDUFB3O43676 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFB3O43676 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFB3O43676 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFB3O43676 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFB3O43676 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
NDUFB3O43676 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFB3O43676 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFB3O43676 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms