Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.57■□□□□ 0.72
XRCC2O43543 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
XRCC2O43543 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
XRCC2O43543 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.57■□□□□ 0.72
XRCC2O43543 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
XRCC2O43543 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
XRCC2O43543 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
XRCC2O43543 RARRES2P1-201ENST00000474487 481 ntBASIC19.57■□□□□ 0.72
XRCC2O43543 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.57■□□□□ 0.72
XRCC2O43543 KRT125P-201ENST00000546827 989 ntBASIC19.57■□□□□ 0.72
XRCC2O43543 Z92544.1-202ENST00000571933 1220 ntBASIC19.57■□□□□ 0.72
XRCC2O43543 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
XRCC2O43543 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
XRCC2O43543 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
XRCC2O43543 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
XRCC2O43543 AC012676.1-201ENST00000574705 1949 ntBASIC19.57■□□□□ 0.72
XRCC2O43543 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
XRCC2O43543 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.56■□□□□ 0.72
XRCC2O43543 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC2O43543 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC2O43543 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC2O43543 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC2O43543 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC2O43543 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
XRCC2O43543 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC2O43543 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC2O43543 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.56■□□□□ 0.72
XRCC2O43543 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
XRCC2O43543 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC2O43543 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC2O43543 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
XRCC2O43543 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC2O43543 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC2O43543 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC2O43543 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC2O43543 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC2O43543 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC2O43543 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.55■□□□□ 0.72
XRCC2O43543 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.55■□□□□ 0.72
XRCC2O43543 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
XRCC2O43543 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC2O43543 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC2O43543 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
XRCC2O43543 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC2O43543 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.55■□□□□ 0.72
XRCC2O43543 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
XRCC2O43543 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC2O43543 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
XRCC2O43543 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
XRCC2O43543 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.55■□□□□ 0.72
XRCC2O43543 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC2O43543 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC2O43543 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.55■□□□□ 0.72
XRCC2O43543 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC2O43543 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC2O43543 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC2O43543 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC2O43543 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.54■□□□□ 0.72
XRCC2O43543 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.54■□□□□ 0.72
XRCC2O43543 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.54■□□□□ 0.72
XRCC2O43543 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC2O43543 MIR6722-201ENST00000617286 78 ntBASIC19.54■□□□□ 0.72
XRCC2O43543 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
XRCC2O43543 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.54■□□□□ 0.72
XRCC2O43543 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC2O43543 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.54■□□□□ 0.72
XRCC2O43543 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC2O43543 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC2O43543 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC2O43543 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC2O43543 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC2O43543 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC2O43543 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC2O43543 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC2O43543 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.53■□□□□ 0.72
XRCC2O43543 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.53■□□□□ 0.72
XRCC2O43543 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
XRCC2O43543 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC2O43543 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
XRCC2O43543 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
XRCC2O43543 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
XRCC2O43543 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.52■□□□□ 0.72
XRCC2O43543 AC068473.5-201ENST00000616428 2072 ntBASIC19.52■□□□□ 0.72
XRCC2O43543 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
XRCC2O43543 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.52■□□□□ 0.72
XRCC2O43543 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.52■□□□□ 0.72
XRCC2O43543 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC2O43543 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.51■□□□□ 0.71
XRCC2O43543 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC2O43543 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.51■□□□□ 0.71
XRCC2O43543 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC2O43543 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC2O43543 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC2O43543 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC2O43543 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.51■□□□□ 0.71
XRCC2O43543 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
XRCC2O43543 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
XRCC2O43543 AC092028.1-203ENST00000608262 953 ntBASIC19.51■□□□□ 0.71
XRCC2O43543 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC2O43543 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms