Protein–RNA interactions for Protein: O15530

PDPK1, 3-phosphoinositide-dependent protein kinase 1, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1O15530 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDPK1O15530 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDPK1O15530 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDPK1O15530 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDPK1O15530 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDPK1O15530 AC133561.1-201ENST00000568600 2415 ntBASIC21.34■■□□□ 1.01
PDPK1O15530 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDPK1O15530 AC012676.1-201ENST00000574705 1949 ntBASIC21.34■■□□□ 1.01
PDPK1O15530 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.34■■□□□ 1.01
PDPK1O15530 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.34■■□□□ 1.01
PDPK1O15530 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.34■■□□□ 1.01
PDPK1O15530 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.34■■□□□ 1.01
PDPK1O15530 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDPK1O15530 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDPK1O15530 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.33■■□□□ 1.01
PDPK1O15530 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDPK1O15530 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.33■■□□□ 1.01
PDPK1O15530 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDPK1O15530 BX664725.1-201ENST00000438252 379 ntBASIC21.33■■□□□ 1.01
PDPK1O15530 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.33■■□□□ 1.01
PDPK1O15530 DUSP8P3-201ENST00000399571 1760 ntBASIC21.33■■□□□ 1
PDPK1O15530 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.33■■□□□ 1
PDPK1O15530 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.33■■□□□ 1
PDPK1O15530 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PDPK1O15530 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDPK1O15530 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
PDPK1O15530 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.32■■□□□ 1
PDPK1O15530 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.32■■□□□ 1
PDPK1O15530 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.32■■□□□ 1
PDPK1O15530 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.32■■□□□ 1
PDPK1O15530 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDPK1O15530 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDPK1O15530 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDPK1O15530 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.32■■□□□ 1
PDPK1O15530 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDPK1O15530 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDPK1O15530 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.31■■□□□ 1
PDPK1O15530 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
PDPK1O15530 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
PDPK1O15530 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PDPK1O15530 C9orf163-202ENST00000624034 2573 ntBASIC21.31■■□□□ 1
PDPK1O15530 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.31■■□□□ 1
PDPK1O15530 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDPK1O15530 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDPK1O15530 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.31■■□□□ 1
PDPK1O15530 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.31■■□□□ 1
PDPK1O15530 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDPK1O15530 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDPK1O15530 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDPK1O15530 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDPK1O15530 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PDPK1O15530 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDPK1O15530 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDPK1O15530 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
PDPK1O15530 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PDPK1O15530 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDPK1O15530 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
PDPK1O15530 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDPK1O15530 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDPK1O15530 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.3■■□□□ 1
PDPK1O15530 AC021242.3-201ENST00000607598 1377 ntBASIC21.3■■□□□ 1
PDPK1O15530 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDPK1O15530 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.3■■□□□ 1
PDPK1O15530 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.3■■□□□ 1
PDPK1O15530 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.29■■□□□ 1
PDPK1O15530 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PDPK1O15530 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PDPK1O15530 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.29■■□□□ 1
PDPK1O15530 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDPK1O15530 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.29■■□□□ 1
PDPK1O15530 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.29■■□□□ 1
PDPK1O15530 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PDPK1O15530 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDPK1O15530 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
PDPK1O15530 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PDPK1O15530 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDPK1O15530 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PDPK1O15530 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDPK1O15530 RARRES2P1-201ENST00000474487 481 ntBASIC21.28■■□□□ 1
PDPK1O15530 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.28■■□□□ 1
PDPK1O15530 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.28■■□□□ 1
PDPK1O15530 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDPK1O15530 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PDPK1O15530 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.28■■□□□ 1
PDPK1O15530 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDPK1O15530 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PDPK1O15530 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDPK1O15530 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.27■■□□□ 1
PDPK1O15530 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDPK1O15530 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDPK1O15530 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
PDPK1O15530 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PDPK1O15530 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDPK1O15530 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PDPK1O15530 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDPK1O15530 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDPK1O15530 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
PDPK1O15530 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.27■■□□□ 1
PDPK1O15530 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
PDPK1O15530 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms