Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.06■□□□□ 0.96
NKX2-8O15522 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.06■□□□□ 0.96
NKX2-8O15522 AL137784.2-201ENST00000607332 1000 ntBASIC21.06■□□□□ 0.96
NKX2-8O15522 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NKX2-8O15522 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NKX2-8O15522 HLA-L-211ENST00000482052 1765 ntBASIC21.05■□□□□ 0.96
NKX2-8O15522 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NKX2-8O15522 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.05■□□□□ 0.96
NKX2-8O15522 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.05■□□□□ 0.96
NKX2-8O15522 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.05■□□□□ 0.96
NKX2-8O15522 DUX4L2-201ENST00000561772 1275 ntBASIC21.05■□□□□ 0.96
NKX2-8O15522 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
NKX2-8O15522 DUX4L6-201ENST00000626483 1275 ntBASIC21.05■□□□□ 0.96
NKX2-8O15522 DUX4L1-201ENST00000627662 1275 ntBASIC21.05■□□□□ 0.96
NKX2-8O15522 DUX4L8-201ENST00000629013 1275 ntBASIC21.05■□□□□ 0.96
NKX2-8O15522 DUX4L3-201ENST00000630187 1275 ntBASIC21.05■□□□□ 0.96
NKX2-8O15522 DUX4L7-201ENST00000630678 1275 ntBASIC21.05■□□□□ 0.96
NKX2-8O15522 DUX4L5-201ENST00000630834 1275 ntBASIC21.05■□□□□ 0.96
NKX2-8O15522 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.05■□□□□ 0.96
NKX2-8O15522 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NKX2-8O15522 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NKX2-8O15522 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.04■□□□□ 0.96
NKX2-8O15522 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NKX2-8O15522 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NKX2-8O15522 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NKX2-8O15522 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NKX2-8O15522 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
NKX2-8O15522 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
NKX2-8O15522 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.04■□□□□ 0.96
NKX2-8O15522 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NKX2-8O15522 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.04■□□□□ 0.96
NKX2-8O15522 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.04■□□□□ 0.96
NKX2-8O15522 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NKX2-8O15522 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NKX2-8O15522 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NKX2-8O15522 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NKX2-8O15522 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.04■□□□□ 0.96
NKX2-8O15522 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NKX2-8O15522 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NKX2-8O15522 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.03■□□□□ 0.96
NKX2-8O15522 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NKX2-8O15522 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NKX2-8O15522 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NKX2-8O15522 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NKX2-8O15522 AL161729.1-201ENST00000604104 1402 ntBASIC21.03■□□□□ 0.96
NKX2-8O15522 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NKX2-8O15522 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NKX2-8O15522 AC141586.4-201ENST00000624558 1573 ntBASIC21.02■□□□□ 0.96
NKX2-8O15522 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NKX2-8O15522 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NKX2-8O15522 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NKX2-8O15522 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NKX2-8O15522 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.02■□□□□ 0.96
NKX2-8O15522 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.02■□□□□ 0.96
NKX2-8O15522 MIR6084-201ENST00000622012 110 ntBASIC21.02■□□□□ 0.96
NKX2-8O15522 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NKX2-8O15522 ALDH1A3-203ENST00000557963 1670 ntBASIC21.02■□□□□ 0.95
NKX2-8O15522 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NKX2-8O15522 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
NKX2-8O15522 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.01■□□□□ 0.95
NKX2-8O15522 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.01■□□□□ 0.95
NKX2-8O15522 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.01■□□□□ 0.95
NKX2-8O15522 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NKX2-8O15522 AL358852.1-201ENST00000623174 1268 ntBASIC21.01■□□□□ 0.95
NKX2-8O15522 AC092437.1-201ENST00000624794 1048 ntBASIC21.01■□□□□ 0.95
NKX2-8O15522 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NKX2-8O15522 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NKX2-8O15522 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NKX2-8O15522 AC091060.1-201ENST00000623524 1766 ntBASIC21■□□□□ 0.95
NKX2-8O15522 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NKX2-8O15522 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21■□□□□ 0.95
NKX2-8O15522 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21■□□□□ 0.95
NKX2-8O15522 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21■□□□□ 0.95
NKX2-8O15522 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NKX2-8O15522 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NKX2-8O15522 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NKX2-8O15522 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NKX2-8O15522 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.99■□□□□ 0.95
NKX2-8O15522 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
NKX2-8O15522 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NKX2-8O15522 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.99■□□□□ 0.95
NKX2-8O15522 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NKX2-8O15522 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NKX2-8O15522 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
NKX2-8O15522 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NKX2-8O15522 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NKX2-8O15522 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.98■□□□□ 0.95
NKX2-8O15522 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NKX2-8O15522 MIR572-201ENST00000384983 95 ntBASIC20.98■□□□□ 0.95
NKX2-8O15522 AC027612.3-201ENST00000413684 1047 ntBASIC20.98■□□□□ 0.95
NKX2-8O15522 AC004911.1-201ENST00000416316 871 ntBASIC20.98■□□□□ 0.95
NKX2-8O15522 AC123595.1-201ENST00000440769 1046 ntBASIC20.98■□□□□ 0.95
NKX2-8O15522 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.98■□□□□ 0.95
NKX2-8O15522 IGHV3-19-201ENST00000521488 291 ntBASIC20.98■□□□□ 0.95
NKX2-8O15522 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.98■□□□□ 0.95
NKX2-8O15522 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NKX2-8O15522 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.98■□□□□ 0.95
NKX2-8O15522 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NKX2-8O15522 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.98■□□□□ 0.95
NKX2-8O15522 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms