Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM235A6NFC5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM235A6NFC5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TMEM235A6NFC5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TMEM235A6NFC5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM235A6NFC5 PKD1P6-201ENST00000343738 4769 ntBASIC19.25■□□□□ 0.67
TMEM235A6NFC5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM235A6NFC5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.25■□□□□ 0.67
TMEM235A6NFC5 RPS2P7-201ENST00000447334 885 ntBASIC19.25■□□□□ 0.67
TMEM235A6NFC5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM235A6NFC5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM235A6NFC5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM235A6NFC5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM235A6NFC5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM235A6NFC5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM235A6NFC5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM235A6NFC5 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.25■□□□□ 0.67
TMEM235A6NFC5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM235A6NFC5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM235A6NFC5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM235A6NFC5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM235A6NFC5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM235A6NFC5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM235A6NFC5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM235A6NFC5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TMEM235A6NFC5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM235A6NFC5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM235A6NFC5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM235A6NFC5 AL022069.1-201ENST00000568025 1636 ntBASIC19.23■□□□□ 0.67
TMEM235A6NFC5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TMEM235A6NFC5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM235A6NFC5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.23■□□□□ 0.67
TMEM235A6NFC5 MIR7108-201ENST00000614319 87 ntBASIC19.23■□□□□ 0.67
TMEM235A6NFC5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TMEM235A6NFC5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM235A6NFC5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM235A6NFC5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TMEM235A6NFC5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM235A6NFC5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TMEM235A6NFC5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM235A6NFC5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM235A6NFC5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM235A6NFC5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM235A6NFC5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM235A6NFC5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM235A6NFC5 AC137767.1-201ENST00000602918 1920 ntBASIC19.22■□□□□ 0.67
TMEM235A6NFC5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM235A6NFC5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
TMEM235A6NFC5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM235A6NFC5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM235A6NFC5 AC133552.2-201ENST00000619106 1032 ntBASIC19.22■□□□□ 0.67
TMEM235A6NFC5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM235A6NFC5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM235A6NFC5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM235A6NFC5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM235A6NFC5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM235A6NFC5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM235A6NFC5 AL592295.1-201ENST00000400984 884 ntBASIC19.21■□□□□ 0.67
TMEM235A6NFC5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM235A6NFC5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM235A6NFC5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
TMEM235A6NFC5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM235A6NFC5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM235A6NFC5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM235A6NFC5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM235A6NFC5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM235A6NFC5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM235A6NFC5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM235A6NFC5 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM235A6NFC5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM235A6NFC5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM235A6NFC5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM235A6NFC5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TMEM235A6NFC5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEM235A6NFC5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM235A6NFC5 AC007375.3-201ENST00000600936 2314 ntBASIC19.18■□□□□ 0.66
TMEM235A6NFC5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM235A6NFC5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM235A6NFC5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM235A6NFC5 GPX1-201ENST00000419349 1106 ntBASIC19.18■□□□□ 0.66
TMEM235A6NFC5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.18■□□□□ 0.66
TMEM235A6NFC5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.18■□□□□ 0.66
TMEM235A6NFC5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM235A6NFC5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms