Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM129A0AVI4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TMEM129A0AVI4 AC103724.3-201ENST00000564481 992 ntBASIC20.4■□□□□ 0.86
TMEM129A0AVI4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.4■□□□□ 0.86
TMEM129A0AVI4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.4■□□□□ 0.86
TMEM129A0AVI4 AL161729.1-201ENST00000604104 1402 ntBASIC20.4■□□□□ 0.86
TMEM129A0AVI4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM129A0AVI4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMEM129A0AVI4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMEM129A0AVI4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMEM129A0AVI4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TMEM129A0AVI4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.39■□□□□ 0.86
TMEM129A0AVI4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM129A0AVI4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM129A0AVI4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TMEM129A0AVI4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM129A0AVI4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.39■□□□□ 0.85
TMEM129A0AVI4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.39■□□□□ 0.85
TMEM129A0AVI4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM129A0AVI4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM129A0AVI4 AC137767.1-201ENST00000602918 1920 ntBASIC20.39■□□□□ 0.85
TMEM129A0AVI4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM129A0AVI4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM129A0AVI4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM129A0AVI4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM129A0AVI4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM129A0AVI4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM129A0AVI4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM129A0AVI4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM129A0AVI4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.38■□□□□ 0.85
TMEM129A0AVI4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.38■□□□□ 0.85
TMEM129A0AVI4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM129A0AVI4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM129A0AVI4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM129A0AVI4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TMEM129A0AVI4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TMEM129A0AVI4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM129A0AVI4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM129A0AVI4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM129A0AVI4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM129A0AVI4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM129A0AVI4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM129A0AVI4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM129A0AVI4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.37■□□□□ 0.85
TMEM129A0AVI4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM129A0AVI4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM129A0AVI4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
TMEM129A0AVI4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TMEM129A0AVI4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
TMEM129A0AVI4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM129A0AVI4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM129A0AVI4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM129A0AVI4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TMEM129A0AVI4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.36■□□□□ 0.85
TMEM129A0AVI4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.36■□□□□ 0.85
TMEM129A0AVI4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM129A0AVI4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM129A0AVI4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.36■□□□□ 0.85
TMEM129A0AVI4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.36■□□□□ 0.85
TMEM129A0AVI4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
TMEM129A0AVI4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM129A0AVI4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM129A0AVI4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM129A0AVI4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.35■□□□□ 0.85
TMEM129A0AVI4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.35■□□□□ 0.85
TMEM129A0AVI4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM129A0AVI4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM129A0AVI4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM129A0AVI4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM129A0AVI4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.35■□□□□ 0.85
TMEM129A0AVI4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.35■□□□□ 0.85
TMEM129A0AVI4 AL035685.1-201ENST00000636663 812 ntBASIC20.35■□□□□ 0.85
TMEM129A0AVI4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM129A0AVI4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM129A0AVI4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM129A0AVI4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM129A0AVI4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
TMEM129A0AVI4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM129A0AVI4 AC022616.5-201ENST00000518796 181 ntBASIC20.34■□□□□ 0.85
TMEM129A0AVI4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
TMEM129A0AVI4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.34■□□□□ 0.85
TMEM129A0AVI4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM129A0AVI4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM129A0AVI4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
TMEM129A0AVI4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
TMEM129A0AVI4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM129A0AVI4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM129A0AVI4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM129A0AVI4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM129A0AVI4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM129A0AVI4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM129A0AVI4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM129A0AVI4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.33■□□□□ 0.84
TMEM129A0AVI4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM129A0AVI4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.33■□□□□ 0.84
TMEM129A0AVI4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM129A0AVI4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM129A0AVI4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TMEM129A0AVI4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM129A0AVI4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms