Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-4A0A1B0GX49 AC068473.5-201ENST00000616428 2072 ntBASIC15.93■□□□□ 0.14
TRBV6-4A0A1B0GX49 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV6-4A0A1B0GX49 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-4A0A1B0GX49 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-4A0A1B0GX49 AC021242.3-201ENST00000607598 1377 ntBASIC15.93■□□□□ 0.14
TRBV6-4A0A1B0GX49 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.93■□□□□ 0.14
TRBV6-4A0A1B0GX49 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.93■□□□□ 0.14
TRBV6-4A0A1B0GX49 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-4A0A1B0GX49 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-4A0A1B0GX49 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-4A0A1B0GX49 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.93■□□□□ 0.14
TRBV6-4A0A1B0GX49 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-4A0A1B0GX49 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-4A0A1B0GX49 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV6-4A0A1B0GX49 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRBV6-4A0A1B0GX49 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.92■□□□□ 0.14
TRBV6-4A0A1B0GX49 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-4A0A1B0GX49 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRBV6-4A0A1B0GX49 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRBV6-4A0A1B0GX49 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-4A0A1B0GX49 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-4A0A1B0GX49 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV6-4A0A1B0GX49 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-4A0A1B0GX49 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.91■□□□□ 0.14
TRBV6-4A0A1B0GX49 MIR6722-201ENST00000617286 78 ntBASIC15.91■□□□□ 0.14
TRBV6-4A0A1B0GX49 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC15.91■□□□□ 0.14
TRBV6-4A0A1B0GX49 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC15.91■□□□□ 0.14
TRBV6-4A0A1B0GX49 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRBV6-4A0A1B0GX49 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-4A0A1B0GX49 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-4A0A1B0GX49 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-4A0A1B0GX49 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 Z92544.1-202ENST00000571933 1220 ntBASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-4A0A1B0GX49 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 KRT125P-201ENST00000546827 989 ntBASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV6-4A0A1B0GX49 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 AC005703.6-201ENST00000623265 1329 ntBASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 ME2-208ENST00000638937 2471 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-4A0A1B0GX49 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.87■□□□□ 0.13
TRBV6-4A0A1B0GX49 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TRBV6-4A0A1B0GX49 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-4A0A1B0GX49 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-4A0A1B0GX49 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-4A0A1B0GX49 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-4A0A1B0GX49 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-4A0A1B0GX49 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.87■□□□□ 0.13
TRBV6-4A0A1B0GX49 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-4A0A1B0GX49 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV6-4A0A1B0GX49 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV6-4A0A1B0GX49 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms