Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 AC241377.3-202ENST00000626088 1088 ntBASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 AC241585.3-202ENST00000628937 1088 ntBASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 AC245100.8-202ENST00000629247 1058 ntBASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV25A0A0B4J276 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV25A0A0B4J276 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV25A0A0B4J276 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV25A0A0B4J276 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAV25A0A0B4J276 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV25A0A0B4J276 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV25A0A0B4J276 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV25A0A0B4J276 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV25A0A0B4J276 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV25A0A0B4J276 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV25A0A0B4J276 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV25A0A0B4J276 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV25A0A0B4J276 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV25A0A0B4J276 AL136116.3-201ENST00000402907 1138 ntBASIC16.95■□□□□ 0.3
TRAV25A0A0B4J276 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV25A0A0B4J276 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.95■□□□□ 0.3
TRAV25A0A0B4J276 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV25A0A0B4J276 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAV25A0A0B4J276 C17orf82-201ENST00000623772 1530 ntBASIC16.95■□□□□ 0.3
TRAV25A0A0B4J276 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV25A0A0B4J276 FP325331.1-202ENST00000623531 1380 ntBASIC16.94■□□□□ 0.3
TRAV25A0A0B4J276 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV25A0A0B4J276 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV25A0A0B4J276 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV25A0A0B4J276 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV25A0A0B4J276 DUX4L19-201ENST00000557448 1267 ntBASIC16.94■□□□□ 0.3
TRAV25A0A0B4J276 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.94■□□□□ 0.3
TRAV25A0A0B4J276 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV25A0A0B4J276 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV25A0A0B4J276 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV25A0A0B4J276 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV25A0A0B4J276 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV25A0A0B4J276 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV25A0A0B4J276 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV25A0A0B4J276 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRAV25A0A0B4J276 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRAV25A0A0B4J276 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV25A0A0B4J276 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV25A0A0B4J276 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV25A0A0B4J276 MIR4466-201ENST00000606121 54 ntBASIC16.93■□□□□ 0.3
TRAV25A0A0B4J276 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV25A0A0B4J276 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV25A0A0B4J276 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV25A0A0B4J276 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV25A0A0B4J276 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV25A0A0B4J276 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRAV25A0A0B4J276 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV25A0A0B4J276 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV25A0A0B4J276 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV25A0A0B4J276 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV25A0A0B4J276 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV25A0A0B4J276 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV25A0A0B4J276 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV25A0A0B4J276 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV25A0A0B4J276 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV25A0A0B4J276 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRAV25A0A0B4J276 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV25A0A0B4J276 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV25A0A0B4J276 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV25A0A0B4J276 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV25A0A0B4J276 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV25A0A0B4J276 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV25A0A0B4J276 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV25A0A0B4J276 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV25A0A0B4J276 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV25A0A0B4J276 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV25A0A0B4J276 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
TRAV25A0A0B4J276 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV25A0A0B4J276 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV25A0A0B4J276 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV25A0A0B4J276 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV25A0A0B4J276 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV25A0A0B4J276 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms