Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV9-1A0A075B6T8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
TRAV9-1A0A075B6T8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV9-1A0A075B6T8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV9-1A0A075B6T8 AL359258.2-201ENST00000564063 1566 ntBASIC17■□□□□ 0.31
TRAV9-1A0A075B6T8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRAV9-1A0A075B6T8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRAV9-1A0A075B6T8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV9-1A0A075B6T8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV9-1A0A075B6T8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV9-1A0A075B6T8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
TRAV9-1A0A075B6T8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV9-1A0A075B6T8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV9-1A0A075B6T8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV9-1A0A075B6T8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV9-1A0A075B6T8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRAV9-1A0A075B6T8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRAV9-1A0A075B6T8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV9-1A0A075B6T8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV9-1A0A075B6T8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV9-1A0A075B6T8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRAV9-1A0A075B6T8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV9-1A0A075B6T8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV9-1A0A075B6T8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV9-1A0A075B6T8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRAV9-1A0A075B6T8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV9-1A0A075B6T8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-1A0A075B6T8 AL161729.1-201ENST00000604104 1402 ntBASIC16.97■□□□□ 0.31
TRAV9-1A0A075B6T8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-1A0A075B6T8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-1A0A075B6T8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-1A0A075B6T8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV9-1A0A075B6T8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-1A0A075B6T8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV9-1A0A075B6T8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-1A0A075B6T8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-1A0A075B6T8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-1A0A075B6T8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV9-1A0A075B6T8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV9-1A0A075B6T8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV9-1A0A075B6T8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV9-1A0A075B6T8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV9-1A0A075B6T8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRAV9-1A0A075B6T8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV9-1A0A075B6T8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV9-1A0A075B6T8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV9-1A0A075B6T8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV9-1A0A075B6T8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV9-1A0A075B6T8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV9-1A0A075B6T8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV9-1A0A075B6T8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV9-1A0A075B6T8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.96■□□□□ 0.3
TRAV9-1A0A075B6T8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV9-1A0A075B6T8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.96■□□□□ 0.3
TRAV9-1A0A075B6T8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV9-1A0A075B6T8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV9-1A0A075B6T8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV9-1A0A075B6T8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV9-1A0A075B6T8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV9-1A0A075B6T8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV9-1A0A075B6T8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV9-1A0A075B6T8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV9-1A0A075B6T8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRAV9-1A0A075B6T8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRAV9-1A0A075B6T8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
TRAV9-1A0A075B6T8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV9-1A0A075B6T8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV9-1A0A075B6T8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.95■□□□□ 0.3
TRAV9-1A0A075B6T8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
TRAV9-1A0A075B6T8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-1A0A075B6T8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-1A0A075B6T8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.94■□□□□ 0.3
TRAV9-1A0A075B6T8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-1A0A075B6T8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-1A0A075B6T8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-1A0A075B6T8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRAV9-1A0A075B6T8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-1A0A075B6T8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV9-1A0A075B6T8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-1A0A075B6T8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-1A0A075B6T8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-1A0A075B6T8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-1A0A075B6T8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV9-1A0A075B6T8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV9-1A0A075B6T8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV9-1A0A075B6T8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV9-1A0A075B6T8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV9-1A0A075B6T8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV9-1A0A075B6T8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV9-1A0A075B6T8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV9-1A0A075B6T8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV9-1A0A075B6T8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV9-1A0A075B6T8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV9-1A0A075B6T8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV9-1A0A075B6T8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRAV9-1A0A075B6T8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRAV9-1A0A075B6T8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-1A0A075B6T8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-1A0A075B6T8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-1A0A075B6T8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms