Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 AC012358.2-201ENST00000430010 1434 ntBASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 SUCLG2P2-201ENST00000307241 1296 ntBASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 FOLR1-201ENST00000312293 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 AL356414.1-201ENST00000379526 686 ntTSL 3 BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 NT5CP2-201ENST00000553305 561 ntBASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 AC103740.2-201ENST00000557900 1225 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 AL590824.1-201ENST00000403828 1349 ntBASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 OR2A14-201ENST00000408899 1012 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 OR2A5-201ENST00000408906 1013 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 TEPP-202ENST00000441824 998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 AC007255.1-202ENST00000447171 889 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 AC023886.1-202ENST00000504009 477 ntTSL 3 BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 HNRNPA1P55-201ENST00000505935 955 ntBASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 AC091564.7-201ENST00000545572 464 ntTSL 3 BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 NRADDP-202ENST00000641269 1585 ntBASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
RIMBP3Q9UFD9 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 PPATP1-201ENST00000496669 1547 ntBASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 IFT43-202ENST00000314067 833 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 MYADML-202ENST00000490394 797 ntTSL 3 BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 AL354993.2-201ENST00000558738 542 ntTSL 4 BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 RN7SL341P-201ENST00000613745 298 ntBASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 AC024580.2-201ENST00000623363 231 ntBASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 MX1-218ENST00000619682 1980 ntTSL 5 BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIMBP3Q9UFD9 ZNF816-201ENST00000270457 582 ntTSL 3 BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 AC073592.1-201ENST00000543970 1282 ntTSL 3 BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 BX640514.1-201ENST00000583223 1918 ntBASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 KLK8-201ENST00000291726 853 ntTSL 5 BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 RPL15-202ENST00000354811 820 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 PIN1P1-202ENST00000439639 301 ntBASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 GDPD1-205ENST00000581140 1265 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms