Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 AC020931.1-201ENST00000589622 1346 ntBASIC19.89■□□□□ 0.78
SPHKAPQ2M3C7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SPHKAPQ2M3C7 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SPHKAPQ2M3C7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SPHKAPQ2M3C7 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 AC133141.1-201ENST00000443015 339 ntBASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 AC005912.2-201ENST00000619492 2400 ntBASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPHKAPQ2M3C7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 KRT18P33-201ENST00000398525 1043 ntBASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 AC093700.1-201ENST00000503348 717 ntBASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 MST1P2-201ENST00000457982 2291 ntBASIC19.88■□□□□ 0.77
SPHKAPQ2M3C7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 AL513497.1-201ENST00000624273 2083 ntBASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 NQO2-204ENST00000380454 851 ntTSL 2 BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 OR7E155P-201ENST00000412208 1014 ntBASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 GUCY2EP-203ENST00000531117 1918 ntBASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHKAPQ2M3C7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPHKAPQ2M3C7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC19.86■□□□□ 0.77
SPHKAPQ2M3C7 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SPHKAPQ2M3C7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.86■□□□□ 0.77
SPHKAPQ2M3C7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
SPHKAPQ2M3C7 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPHKAPQ2M3C7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SPHKAPQ2M3C7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPHKAPQ2M3C7 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPHKAPQ2M3C7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms