Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC27Q2M243 AL133467.4-201ENST00000602953 725 ntBASIC18.51■□□□□ 0.55
CCDC27Q2M243 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC27Q2M243 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC27Q2M243 AC009560.1-201ENST00000620208 434 ntBASIC18.51■□□□□ 0.55
CCDC27Q2M243 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.51■□□□□ 0.55
CCDC27Q2M243 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
CCDC27Q2M243 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC27Q2M243 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC27Q2M243 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC27Q2M243 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC27Q2M243 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC27Q2M243 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC27Q2M243 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC27Q2M243 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC27Q2M243 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
CCDC27Q2M243 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC27Q2M243 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC27Q2M243 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC27Q2M243 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC27Q2M243 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC27Q2M243 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC27Q2M243 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC27Q2M243 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC27Q2M243 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC27Q2M243 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 LINC00265-2P-201ENST00000413372 782 ntBASIC18.5■□□□□ 0.55
CCDC27Q2M243 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 NUP210P1-202ENST00000504322 710 ntBASIC18.5■□□□□ 0.55
CCDC27Q2M243 ALG1L13P-202ENST00000519320 584 ntBASIC18.5■□□□□ 0.55
CCDC27Q2M243 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 CHMP4BP1-201ENST00000556017 588 ntBASIC18.5■□□□□ 0.55
CCDC27Q2M243 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 CDK7-214ENST00000626796 358 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 LINC02486-201ENST00000604157 3000 ntBASIC18.5■□□□□ 0.55
CCDC27Q2M243 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC27Q2M243 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 KRT8P43-201ENST00000406052 1458 ntBASIC18.5■□□□□ 0.55
CCDC27Q2M243 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 AC008620.2-201ENST00000510294 1569 ntBASIC18.5■□□□□ 0.55
CCDC27Q2M243 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC27Q2M243 SALL4P6-201ENST00000429385 1691 ntBASIC18.5■□□□□ 0.55
CCDC27Q2M243 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC27Q2M243 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC27Q2M243 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 Z97180.1-201ENST00000445173 988 ntBASIC18.49■□□□□ 0.55
CCDC27Q2M243 DUTP3-201ENST00000450025 415 ntBASIC18.49■□□□□ 0.55
CCDC27Q2M243 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 AL021707.6-201ENST00000609212 491 ntBASIC18.49■□□□□ 0.55
CCDC27Q2M243 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC27Q2M243 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC27Q2M243 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC27Q2M243 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms