Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
PER3P56645 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.41□□□□□ -0.26
PER3P56645 AC026316.1-201ENST00000398900 414 ntBASIC13.41□□□□□ -0.26
PER3P56645 AL355334.1-201ENST00000417713 215 ntBASIC13.41□□□□□ -0.26
PER3P56645 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
PER3P56645 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.41□□□□□ -0.26
PER3P56645 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.41□□□□□ -0.26
PER3P56645 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.41□□□□□ -0.26
PER3P56645 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.41□□□□□ -0.26
PER3P56645 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.41□□□□□ -0.26
PER3P56645 AC090164.2-201ENST00000611487 516 ntBASIC13.41□□□□□ -0.26
PER3P56645 RN7SL736P-201ENST00000613111 269 ntBASIC13.41□□□□□ -0.26
PER3P56645 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.41□□□□□ -0.26
PER3P56645 AC138466.3-201ENST00000619983 221 ntBASIC13.41□□□□□ -0.26
PER3P56645 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 AL137783.1-201ENST00000623494 1896 ntBASIC13.41□□□□□ -0.26
PER3P56645 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.41□□□□□ -0.26
PER3P56645 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
PER3P56645 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.41□□□□□ -0.26
PER3P56645 PEG13-201ENST00000631594 5667 ntBASIC13.41□□□□□ -0.26
PER3P56645 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.41□□□□□ -0.26
PER3P56645 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.41□□□□□ -0.26
PER3P56645 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
PER3P56645 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
PER3P56645 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.41□□□□□ -0.26
PER3P56645 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
PER3P56645 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
PER3P56645 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.41□□□□□ -0.26
PER3P56645 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PER3P56645 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 FKBP4P6-201ENST00000457486 1332 ntBASIC13.4□□□□□ -0.26
PER3P56645 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.4□□□□□ -0.26
PER3P56645 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
PER3P56645 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.4□□□□□ -0.26
PER3P56645 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.4□□□□□ -0.26
PER3P56645 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
PER3P56645 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.4□□□□□ -0.26
PER3P56645 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 RN7SKP214-201ENST00000364208 315 ntBASIC13.4□□□□□ -0.26
PER3P56645 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.4□□□□□ -0.26
PER3P56645 PUDPP3-201ENST00000445368 636 ntBASIC13.4□□□□□ -0.26
PER3P56645 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.4□□□□□ -0.26
PER3P56645 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.4□□□□□ -0.26
PER3P56645 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.4□□□□□ -0.26
PER3P56645 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
PER3P56645 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.26
PER3P56645 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
PER3P56645 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.4□□□□□ -0.26
PER3P56645 DUX4L47-201ENST00000566374 394 ntBASIC13.4□□□□□ -0.26
PER3P56645 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 AL136301.1-201ENST00000615830 422 ntBASIC13.4□□□□□ -0.26
PER3P56645 AC103691.2-201ENST00000618824 433 ntBASIC13.4□□□□□ -0.26
PER3P56645 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
PER3P56645 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.4□□□□□ -0.26
PER3P56645 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
PER3P56645 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.4□□□□□ -0.26
PER3P56645 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
PER3P56645 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PER3P56645 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.27
PER3P56645 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.4□□□□□ -0.27
PER3P56645 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.27
PER3P56645 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PER3P56645 CLUHP2-201ENST00000426660 1303 ntBASIC13.39□□□□□ -0.27
PER3P56645 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.39□□□□□ -0.27
PER3P56645 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms