Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AL133467.4-201ENST00000602953 725 ntBASIC14.07□□□□□ -0.16
TRIM23P36406 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM23P36406 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM23P36406 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 TUBB8P4-201ENST00000511806 1324 ntBASIC14.07□□□□□ -0.16
TRIM23P36406 AC074138.1-201ENST00000611182 1303 ntBASIC14.07□□□□□ -0.16
TRIM23P36406 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM23P36406 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRIM23P36406 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
TRIM23P36406 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRIM23P36406 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM23P36406 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM23P36406 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRIM23P36406 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRIM23P36406 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRIM23P36406 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRIM23P36406 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM23P36406 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM23P36406 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM23P36406 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.06□□□□□ -0.16
TRIM23P36406 CHCHD2P2-201ENST00000503744 321 ntBASIC14.06□□□□□ -0.16
TRIM23P36406 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM23P36406 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.06□□□□□ -0.16
TRIM23P36406 RN7SL665P-201ENST00000578793 300 ntBASIC14.06□□□□□ -0.16
TRIM23P36406 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.06□□□□□ -0.16
TRIM23P36406 AC018635.2-201ENST00000608625 364 ntBASIC14.06□□□□□ -0.16
TRIM23P36406 AC073352.2-201ENST00000609385 439 ntBASIC14.06□□□□□ -0.16
TRIM23P36406 AP001184.1-201ENST00000637936 376 ntBASIC14.06□□□□□ -0.16
TRIM23P36406 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM23P36406 AL805961.1-201ENST00000642026 753 ntBASIC14.06□□□□□ -0.16
TRIM23P36406 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM23P36406 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TRIM23P36406 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM23P36406 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRIM23P36406 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM23P36406 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM23P36406 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.05□□□□□ -0.16
TRIM23P36406 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM23P36406 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRIM23P36406 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM23P36406 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM23P36406 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM23P36406 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM23P36406 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM23P36406 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM23P36406 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM23P36406 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM23P36406 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM23P36406 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM23P36406 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM23P36406 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM23P36406 AL512430.1-201ENST00000392575 860 ntBASIC14.05□□□□□ -0.16
TRIM23P36406 HMGA1P1-201ENST00000415560 1062 ntBASIC14.05□□□□□ -0.16
TRIM23P36406 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM23P36406 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.05□□□□□ -0.16
TRIM23P36406 PPP1R2P4-201ENST00000424051 595 ntBASIC14.05□□□□□ -0.16
TRIM23P36406 RPS2P36-201ENST00000456516 831 ntBASIC14.05□□□□□ -0.16
TRIM23P36406 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.05□□□□□ -0.16
TRIM23P36406 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.05□□□□□ -0.16
TRIM23P36406 AC005740.1-201ENST00000515639 522 ntBASIC14.05□□□□□ -0.16
TRIM23P36406 AL031713.1-201ENST00000564813 661 ntBASIC14.05□□□□□ -0.16
TRIM23P36406 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.05□□□□□ -0.16
TRIM23P36406 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM23P36406 AC242376.2-201ENST00000619355 883 ntBASIC14.05□□□□□ -0.16
TRIM23P36406 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM23P36406 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM23P36406 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms