Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 LINC01230-201ENST00000625222 3017 ntBASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA1Q9UND3 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 AC144522.1-201ENST00000625111 1658 ntBASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 AC239868.1-201ENST00000369385 493 ntBASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 AC006122.1-201ENST00000493323 440 ntBASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 RBM8B-201ENST00000555532 525 ntBASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 SPCS2P2-201ENST00000603270 608 ntBASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 MIR193BHG-211ENST00000641433 5365 ntBASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA1Q9UND3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 AC015688.4-201ENST00000580780 1647 ntBASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms