Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC4Q92889 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC16.36■□□□□ 0.21
ERCC4Q92889 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC4Q92889 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC16.36■□□□□ 0.21
ERCC4Q92889 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC4Q92889 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC4Q92889 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.36■□□□□ 0.21
ERCC4Q92889 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ERCC4Q92889 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC16.36■□□□□ 0.21
ERCC4Q92889 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC4Q92889 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC4Q92889 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC4Q92889 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ERCC4Q92889 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC4Q92889 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ERCC4Q92889 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC16.35■□□□□ 0.21
ERCC4Q92889 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC4Q92889 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC16.35■□□□□ 0.21
ERCC4Q92889 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC4Q92889 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC4Q92889 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.35■□□□□ 0.21
ERCC4Q92889 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC4Q92889 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC4Q92889 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC4Q92889 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC4Q92889 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC4Q92889 CICP12-201ENST00000455801 843 ntBASIC16.35■□□□□ 0.21
ERCC4Q92889 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.35■□□□□ 0.21
ERCC4Q92889 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.35■□□□□ 0.21
ERCC4Q92889 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.35■□□□□ 0.21
ERCC4Q92889 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.35■□□□□ 0.21
ERCC4Q92889 AC002472.3-201ENST00000640124 621 ntBASIC16.35■□□□□ 0.21
ERCC4Q92889 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC4Q92889 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC4Q92889 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ERCC4Q92889 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ERCC4Q92889 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC16.35■□□□□ 0.21
ERCC4Q92889 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC4Q92889 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC4Q92889 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC16.35■□□□□ 0.21
ERCC4Q92889 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
ERCC4Q92889 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
ERCC4Q92889 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC16.34■□□□□ 0.21
ERCC4Q92889 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ERCC4Q92889 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ERCC4Q92889 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC16.34■□□□□ 0.21
ERCC4Q92889 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.34■□□□□ 0.21
ERCC4Q92889 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ERCC4Q92889 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.34■□□□□ 0.21
ERCC4Q92889 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 ARSEP1-201ENST00000420443 635 ntBASIC16.34■□□□□ 0.21
ERCC4Q92889 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 AC011495.1-201ENST00000498085 584 ntBASIC16.34■□□□□ 0.21
ERCC4Q92889 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.34■□□□□ 0.21
ERCC4Q92889 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.34■□□□□ 0.21
ERCC4Q92889 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ERCC4Q92889 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC16.34■□□□□ 0.21
ERCC4Q92889 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
ERCC4Q92889 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ERCC4Q92889 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ERCC4Q92889 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ERCC4Q92889 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
ERCC4Q92889 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
ERCC4Q92889 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ERCC4Q92889 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
ERCC4Q92889 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ERCC4Q92889 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ERCC4Q92889 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.33■□□□□ 0.21
ERCC4Q92889 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ERCC4Q92889 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
ERCC4Q92889 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.33■□□□□ 0.21
ERCC4Q92889 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
ERCC4Q92889 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.33■□□□□ 0.21
ERCC4Q92889 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC4Q92889 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC16.33■□□□□ 0.2
ERCC4Q92889 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.33■□□□□ 0.2
ERCC4Q92889 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC4Q92889 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.33■□□□□ 0.2
ERCC4Q92889 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ERCC4Q92889 AC092933.1-201ENST00000393644 945 ntBASIC16.33■□□□□ 0.2
ERCC4Q92889 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.33■□□□□ 0.2
ERCC4Q92889 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.33■□□□□ 0.2
ERCC4Q92889 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.33■□□□□ 0.2
ERCC4Q92889 CRB3P1-201ENST00000449338 276 ntBASIC16.33■□□□□ 0.2
ERCC4Q92889 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.33■□□□□ 0.2
ERCC4Q92889 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.33■□□□□ 0.2
ERCC4Q92889 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms