Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 AC138035.3-201ENST00000622706 2791 ntBASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 AC007279.1-201ENST00000448547 837 ntBASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 RN7SL477P-201ENST00000488440 286 ntBASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 FAM223B-202ENST00000598177 713 ntBASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 AC092535.4-201ENST00000609548 397 ntBASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 FAM223A-202ENST00000625204 713 ntBASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 GSN-209ENST00000449733 2702 ntTSL 2 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC20.36■□□□□ 0.85
ARHGEF40Q8TER5 WARS-203ENST00000358655 2466 ntTSL 2 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 AL513477.1-201ENST00000602865 2407 ntBASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 RNA5SP84-201ENST00000364740 107 ntBASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 FTLP3-201ENST00000427242 528 ntBASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 RN7SL789P-201ENST00000478944 293 ntBASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 RN7SL76P-201ENST00000482435 289 ntBASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 MDC1-209ENST00000613547 830 ntTSL 5 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 RN7SL832P-201ENST00000607781 1756 ntBASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 AL109954.1-202ENST00000564051 2148 ntBASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
ARHGEF40Q8TER5 ZEB1-AS1-208ENST00000607166 2503 ntBASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 SNORA50D-201ENST00000408059 134 ntBASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 TMEM256P1-201ENST00000430550 340 ntBASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms