Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AL160314.3-201ENST00000556041 767 ntBASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SMARCC2Q8TAQ2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 AC144522.1-201ENST00000625111 1658 ntBASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 VDAC1P1-201ENST00000439229 848 ntBASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 SCARNA21-201ENST00000517026 139 ntBASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 AC124068.2-201ENST00000569473 1109 ntBASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 NDUFV2P1-201ENST00000596415 907 ntBASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 AC090386.2-201ENST00000623010 1039 ntBASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 AL139099.5-201ENST00000635274 300 ntBASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMARCC2Q8TAQ2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 AL928654.5-201ENST00000624831 2501 ntBASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 HADH-202ENST00000403312 1752 ntTSL 5 BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 KRT18P36-201ENST00000411618 1276 ntBASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 BCYRN1-201ENST00000418539 200 ntBASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 AC011742.3-201ENST00000439053 820 ntBASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 AC006122.1-201ENST00000493323 440 ntBASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 HLA-J-204ENST00000495278 958 ntBASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 AC022217.1-201ENST00000521069 738 ntBASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 ACTG1P17-201ENST00000558391 1119 ntBASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 AC021016.3-201ENST00000608367 477 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms