Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 AC007663.3-201ENST00000609632 465 ntBASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 AL022313.4-201ENST00000562756 2046 ntBASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HERC4Q5GLZ8 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HERC4Q5GLZ8 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HERC4Q5GLZ8 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.08■□□□□ 0.17
HERC4Q5GLZ8 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HERC4Q5GLZ8 AC144522.1-201ENST00000625111 1658 ntBASIC16.08■□□□□ 0.17
HERC4Q5GLZ8 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HERC4Q5GLZ8 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HERC4Q5GLZ8 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HERC4Q5GLZ8 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HERC4Q5GLZ8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 RN7SL11P-201ENST00000471305 293 ntBASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 SERPINA13P-202ENST00000478994 924 ntBASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 AC044849.1-201ENST00000519737 1188 ntBASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 AL160314.3-201ENST00000556041 767 ntBASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 TUBBP5-203ENST00000508529 1334 ntBASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
HERC4Q5GLZ8 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 ST13P19-201ENST00000442505 1124 ntBASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 RNMTL1P1-201ENST00000454103 560 ntBASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 TUBB8P8-201ENST00000458717 1058 ntBASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 RN7SL774P-201ENST00000577467 290 ntBASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 MIR3147-201ENST00000577811 66 ntBASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 AL133499.1-201ENST00000596207 608 ntBASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 KRT8P29-201ENST00000420409 1371 ntBASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms