Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKL1Q00532 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 BEND3P3-201ENST00000611030 2440 ntBASIC14.18□□□□□ -0.14
CDKL1Q00532 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 ANKRD19P-201ENST00000338192 862 ntBASIC14.18□□□□□ -0.14
CDKL1Q00532 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.18□□□□□ -0.14
CDKL1Q00532 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 MIR1909-201ENST00000411312 80 ntBASIC14.18□□□□□ -0.14
CDKL1Q00532 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.18□□□□□ -0.14
CDKL1Q00532 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKL1Q00532 ACA64.2-201ENST00000459014 129 ntBASIC14.18□□□□□ -0.14
CDKL1Q00532 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CDKL1Q00532 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.18□□□□□ -0.14
CDKL1Q00532 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.18□□□□□ -0.14
CDKL1Q00532 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.18□□□□□ -0.14
CDKL1Q00532 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CDKL1Q00532 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKL1Q00532 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 REXO1L6P-201ENST00000603433 1515 ntBASIC14.18□□□□□ -0.14
CDKL1Q00532 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CDKL1Q00532 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CDKL1Q00532 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKL1Q00532 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CDKL1Q00532 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKL1Q00532 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKL1Q00532 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 AC138969.2-201ENST00000532739 9932 ntBASIC14.18□□□□□ -0.14
CDKL1Q00532 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.18□□□□□ -0.14
CDKL1Q00532 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CDKL1Q00532 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CDKL1Q00532 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CDKL1Q00532 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDKL1Q00532 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CDKL1Q00532 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.17□□□□□ -0.14
CDKL1Q00532 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.17□□□□□ -0.14
CDKL1Q00532 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CDKL1Q00532 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CDKL1Q00532 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.17□□□□□ -0.14
CDKL1Q00532 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.17□□□□□ -0.14
CDKL1Q00532 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.17□□□□□ -0.14
CDKL1Q00532 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDKL1Q00532 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.17□□□□□ -0.14
CDKL1Q00532 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.17□□□□□ -0.14
CDKL1Q00532 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.17□□□□□ -0.14
CDKL1Q00532 MIR4783-201ENST00000580343 82 ntBASIC14.17□□□□□ -0.14
CDKL1Q00532 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.17□□□□□ -0.14
CDKL1Q00532 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.17□□□□□ -0.14
CDKL1Q00532 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CDKL1Q00532 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.17□□□□□ -0.14
CDKL1Q00532 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDKL1Q00532 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CDKL1Q00532 AC244394.1-201ENST00000435000 1665 ntBASIC14.17□□□□□ -0.14
CDKL1Q00532 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKL1Q00532 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDKL1Q00532 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.17□□□□□ -0.14
CDKL1Q00532 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKL1Q00532 AL008718.2-201ENST00000609206 1313 ntBASIC14.16□□□□□ -0.14
CDKL1Q00532 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CDKL1Q00532 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.16□□□□□ -0.14
CDKL1Q00532 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CDKL1Q00532 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKL1Q00532 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
CDKL1Q00532 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKL1Q00532 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.16□□□□□ -0.14
CDKL1Q00532 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKL1Q00532 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDKL1Q00532 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDKL1Q00532 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDKL1Q00532 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDKL1Q00532 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKL1Q00532 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms