Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.18■□□□□ 0.18
TPM4P67936 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TPM4P67936 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.18■□□□□ 0.18
TPM4P67936 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TPM4P67936 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 AC135782.3-201ENST00000562782 2105 ntBASIC16.18■□□□□ 0.18
TPM4P67936 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.18■□□□□ 0.18
TPM4P67936 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC16.18■□□□□ 0.18
TPM4P67936 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
TPM4P67936 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM4P67936 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
TPM4P67936 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TPM4P67936 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM4P67936 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TPM4P67936 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 CES1P1-201ENST00000421606 1704 ntBASIC16.17■□□□□ 0.18
TPM4P67936 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.17■□□□□ 0.18
TPM4P67936 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TPM4P67936 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.17■□□□□ 0.18
TPM4P67936 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TPM4P67936 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 NME1-209ENST00000511355 1645 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM4P67936 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
TPM4P67936 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM4P67936 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.17■□□□□ 0.18
TPM4P67936 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM4P67936 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 FTLP10-202ENST00000505798 471 ntBASIC16.17■□□□□ 0.18
TPM4P67936 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.17■□□□□ 0.18
TPM4P67936 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 ENPP7P5-201ENST00000541031 1031 ntBASIC16.17■□□□□ 0.18
TPM4P67936 AC092552.1-201ENST00000547243 906 ntBASIC16.17■□□□□ 0.18
TPM4P67936 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.17■□□□□ 0.18
TPM4P67936 DUX4L27-201ENST00000554796 1261 ntBASIC16.17■□□□□ 0.18
TPM4P67936 AP001063.1-201ENST00000568332 529 ntBASIC16.17■□□□□ 0.18
TPM4P67936 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.17■□□□□ 0.18
TPM4P67936 AC004790.1-201ENST00000612686 536 ntBASIC16.17■□□□□ 0.18
TPM4P67936 MIR8072-201ENST00000614241 80 ntBASIC16.17■□□□□ 0.18
TPM4P67936 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.17■□□□□ 0.18
TPM4P67936 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TPM4P67936 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TPM4P67936 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.17■□□□□ 0.18
TPM4P67936 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 AC009093.10-201ENST00000641956 1442 ntBASIC16.17■□□□□ 0.18
TPM4P67936 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TPM4P67936 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM4P67936 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.17■□□□□ 0.18
TPM4P67936 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM4P67936 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TPM4P67936 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM4P67936 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC16.16■□□□□ 0.18
TPM4P67936 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC16.16■□□□□ 0.18
TPM4P67936 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.16■□□□□ 0.18
TPM4P67936 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TPM4P67936 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM4P67936 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TPM4P67936 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC16.16■□□□□ 0.18
TPM4P67936 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM4P67936 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC16.16■□□□□ 0.18
TPM4P67936 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC16.16■□□□□ 0.18
TPM4P67936 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TPM4P67936 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM4P67936 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM4P67936 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM4P67936 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM4P67936 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM4P67936 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.16■□□□□ 0.18
TPM4P67936 AP000347.1-202ENST00000435868 847 ntBASIC16.16■□□□□ 0.18
TPM4P67936 AK2P2-201ENST00000439142 405 ntBASIC16.16■□□□□ 0.18
TPM4P67936 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM4P67936 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.16■□□□□ 0.18
TPM4P67936 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM4P67936 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
TPM4P67936 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms