Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
VSX2P58304 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VSX2P58304 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.79□□□□□ -0.2
VSX2P58304 AC012618.1-201ENST00000461223 412 ntBASIC13.79□□□□□ -0.2
VSX2P58304 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.79□□□□□ -0.2
VSX2P58304 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.79□□□□□ -0.2
VSX2P58304 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.79□□□□□ -0.2
VSX2P58304 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
VSX2P58304 AL021578.1-201ENST00000613646 709 ntBASIC13.79□□□□□ -0.2
VSX2P58304 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VSX2P58304 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VSX2P58304 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VSX2P58304 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VSX2P58304 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VSX2P58304 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
VSX2P58304 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VSX2P58304 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.79□□□□□ -0.2
VSX2P58304 LAP3P2-201ENST00000454686 1454 ntBASIC13.79□□□□□ -0.2
VSX2P58304 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VSX2P58304 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VSX2P58304 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VSX2P58304 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.79□□□□□ -0.2
VSX2P58304 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VSX2P58304 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
VSX2P58304 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.78□□□□□ -0.2
VSX2P58304 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VSX2P58304 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.78□□□□□ -0.2
VSX2P58304 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.78□□□□□ -0.2
VSX2P58304 CICP20-201ENST00000443330 2801 ntBASIC13.78□□□□□ -0.2
VSX2P58304 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
VSX2P58304 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
VSX2P58304 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
VSX2P58304 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.78□□□□□ -0.2
VSX2P58304 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 AC239868.1-201ENST00000369385 493 ntBASIC13.78□□□□□ -0.2
VSX2P58304 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.78□□□□□ -0.2
VSX2P58304 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.78□□□□□ -0.2
VSX2P58304 ISCA2P1-201ENST00000425548 448 ntBASIC13.78□□□□□ -0.2
VSX2P58304 TSPY25P-201ENST00000429463 745 ntBASIC13.78□□□□□ -0.2
VSX2P58304 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.78□□□□□ -0.2
VSX2P58304 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.78□□□□□ -0.2
VSX2P58304 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.78□□□□□ -0.2
VSX2P58304 AL596276.2-201ENST00000447525 331 ntBASIC13.78□□□□□ -0.2
VSX2P58304 AL133466.1-201ENST00000447582 150 ntBASIC13.78□□□□□ -0.2
VSX2P58304 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.78□□□□□ -0.2
VSX2P58304 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
VSX2P58304 AC024681.1-201ENST00000521917 487 ntBASIC13.78□□□□□ -0.2
VSX2P58304 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.78□□□□□ -0.2
VSX2P58304 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.78□□□□□ -0.2
VSX2P58304 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
VSX2P58304 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.78□□□□□ -0.2
VSX2P58304 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 CU633904.3-201ENST00000624042 1029 ntBASIC13.78□□□□□ -0.2
VSX2P58304 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.78□□□□□ -0.2
VSX2P58304 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.78□□□□□ -0.2
VSX2P58304 AC138627.1-207ENST00000641560 1006 ntBASIC13.78□□□□□ -0.2
VSX2P58304 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.78□□□□□ -0.2
VSX2P58304 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.78□□□□□ -0.2
VSX2P58304 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
VSX2P58304 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.78□□□□□ -0.2
VSX2P58304 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.78□□□□□ -0.2
VSX2P58304 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VSX2P58304 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.78□□□□□ -0.2
VSX2P58304 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VSX2P58304 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
VSX2P58304 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.78□□□□□ -0.2
VSX2P58304 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.78□□□□□ -0.2
VSX2P58304 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
VSX2P58304 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
VSX2P58304 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VSX2P58304 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
VSX2P58304 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
VSX2P58304 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
VSX2P58304 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.77□□□□□ -0.2
VSX2P58304 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.77□□□□□ -0.21
VSX2P58304 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms