Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC061965.1-201ENST00000560524 1465 ntBASIC15.03■□□□□ -0
SLC1A1P43005 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
SLC1A1P43005 SHMT1P1-201ENST00000419974 1312 ntBASIC15.03■□□□□ -0
SLC1A1P43005 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SLC1A1P43005 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.03■□□□□ -0
SLC1A1P43005 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.03■□□□□ -0
SLC1A1P43005 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.03■□□□□ -0
SLC1A1P43005 KLF2P1-201ENST00000447438 1042 ntBASIC15.03■□□□□ -0
SLC1A1P43005 CROCCP4-201ENST00000457096 498 ntBASIC15.03■□□□□ -0
SLC1A1P43005 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.03■□□□□ -0
SLC1A1P43005 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.03■□□□□ -0
SLC1A1P43005 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.03■□□□□ -0
SLC1A1P43005 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.03■□□□□ -0
SLC1A1P43005 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.03■□□□□ -0
SLC1A1P43005 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.03■□□□□ -0
SLC1A1P43005 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.03■□□□□ -0
SLC1A1P43005 AC133540.1-201ENST00000620845 1019 ntBASIC15.03■□□□□ -0
SLC1A1P43005 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.03■□□□□ -0
SLC1A1P43005 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.03■□□□□ -0
SLC1A1P43005 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.03■□□□□ -0
SLC1A1P43005 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SLC1A1P43005 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.03■□□□□ -0
SLC1A1P43005 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.03■□□□□ -0
SLC1A1P43005 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A1P43005 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.02■□□□□ -0
SLC1A1P43005 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A1P43005 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.02■□□□□ -0
SLC1A1P43005 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A1P43005 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.02■□□□□ -0
SLC1A1P43005 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A1P43005 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A1P43005 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC1A1P43005 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SLC1A1P43005 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.02■□□□□ -0
SLC1A1P43005 AHCYP4-201ENST00000419201 1315 ntBASIC15.02■□□□□ -0
SLC1A1P43005 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.02■□□□□ -0
SLC1A1P43005 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SLC1A1P43005 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A1P43005 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A1P43005 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.02■□□□□ -0
SLC1A1P43005 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SLC1A1P43005 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A1P43005 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SLC1A1P43005 AC006122.1-201ENST00000493323 440 ntBASIC15.02■□□□□ -0
SLC1A1P43005 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.02■□□□□ -0
SLC1A1P43005 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.02■□□□□ -0
SLC1A1P43005 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC1A1P43005 MIR3197-201ENST00000582241 73 ntBASIC15.02■□□□□ -0
SLC1A1P43005 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC1A1P43005 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.02■□□□□ -0
SLC1A1P43005 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
SLC1A1P43005 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A1P43005 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A1P43005 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A1P43005 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A1P43005 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.02□□□□□ -0.01
SLC1A1P43005 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
SLC1A1P43005 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A1P43005 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A1P43005 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.02□□□□□ -0.01
SLC1A1P43005 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.02□□□□□ -0.01
SLC1A1P43005 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SLC1A1P43005 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SLC1A1P43005 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A1P43005 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
SLC1A1P43005 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A1P43005 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SLC1A1P43005 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
SLC1A1P43005 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SLC1A1P43005 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC1A1P43005 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SLC1A1P43005 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
SLC1A1P43005 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC1A1P43005 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A1P43005 STK3-218ENST00000617590 2485 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC1A1P43005 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
SLC1A1P43005 AC020658.7-201ENST00000624274 2442 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms