Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HTR1EP28566 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR1EP28566 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR1EP28566 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HTR1EP28566 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.83□□□□□ -0.2
HTR1EP28566 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HTR1EP28566 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.83□□□□□ -0.2
HTR1EP28566 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.83□□□□□ -0.2
HTR1EP28566 AC135782.3-201ENST00000562782 2105 ntBASIC13.83□□□□□ -0.2
HTR1EP28566 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR1EP28566 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.83□□□□□ -0.2
HTR1EP28566 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.83□□□□□ -0.2
HTR1EP28566 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
HTR1EP28566 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.83□□□□□ -0.2
HTR1EP28566 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
HTR1EP28566 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR1EP28566 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.83□□□□□ -0.2
HTR1EP28566 AL590440.2-201ENST00000641973 1595 ntBASIC13.83□□□□□ -0.2
HTR1EP28566 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HTR1EP28566 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HTR1EP28566 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HTR1EP28566 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HTR1EP28566 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.82□□□□□ -0.2
HTR1EP28566 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
HTR1EP28566 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HTR1EP28566 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HTR1EP28566 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HTR1EP28566 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HTR1EP28566 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.82□□□□□ -0.2
HTR1EP28566 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.82□□□□□ -0.2
HTR1EP28566 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
HTR1EP28566 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.82□□□□□ -0.2
HTR1EP28566 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.82□□□□□ -0.2
HTR1EP28566 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.82□□□□□ -0.2
HTR1EP28566 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
HTR1EP28566 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.82□□□□□ -0.2
HTR1EP28566 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.82□□□□□ -0.2
HTR1EP28566 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.82□□□□□ -0.2
HTR1EP28566 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.82□□□□□ -0.2
HTR1EP28566 Z93015.1-201ENST00000451718 390 ntBASIC13.82□□□□□ -0.2
HTR1EP28566 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.82□□□□□ -0.2
HTR1EP28566 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.82□□□□□ -0.2
HTR1EP28566 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.82□□□□□ -0.2
HTR1EP28566 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.82□□□□□ -0.2
HTR1EP28566 AP001582.1-201ENST00000525856 295 ntBASIC13.82□□□□□ -0.2
HTR1EP28566 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.82□□□□□ -0.2
HTR1EP28566 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.82□□□□□ -0.2
HTR1EP28566 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.82□□□□□ -0.2
HTR1EP28566 AC005252.2-201ENST00000624630 1141 ntBASIC13.82□□□□□ -0.2
HTR1EP28566 AC244452.3-201ENST00000636814 210 ntBASIC13.82□□□□□ -0.2
HTR1EP28566 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HTR1EP28566 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HTR1EP28566 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
HTR1EP28566 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.82□□□□□ -0.2
HTR1EP28566 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HTR1EP28566 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HTR1EP28566 AC064801.2-201ENST00000625052 1303 ntBASIC13.82□□□□□ -0.2
HTR1EP28566 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.82□□□□□ -0.2
HTR1EP28566 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.82□□□□□ -0.2
HTR1EP28566 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.82□□□□□ -0.2
HTR1EP28566 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HTR1EP28566 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.81□□□□□ -0.2
HTR1EP28566 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HTR1EP28566 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.81□□□□□ -0.2
HTR1EP28566 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.81□□□□□ -0.2
HTR1EP28566 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.81□□□□□ -0.2
HTR1EP28566 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 LRRC59-203ENST00000576448 1531 ntBASIC13.81□□□□□ -0.2
HTR1EP28566 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HTR1EP28566 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
HTR1EP28566 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms