Protein–RNA interactions for Protein: P20827

EFNA1, Ephrin-A1, humanhuman

Predicted RBP Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1P20827 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNA1P20827 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
EFNA1P20827 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNA1P20827 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNA1P20827 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
EFNA1P20827 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNA1P20827 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 AC064801.2-201ENST00000625052 1303 ntBASIC13.76□□□□□ -0.21
EFNA1P20827 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNA1P20827 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNA1P20827 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.76□□□□□ -0.21
EFNA1P20827 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNA1P20827 AL161932.2-201ENST00000435436 679 ntBASIC13.76□□□□□ -0.21
EFNA1P20827 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNA1P20827 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNA1P20827 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.76□□□□□ -0.21
EFNA1P20827 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNA1P20827 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
EFNA1P20827 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNA1P20827 AP006547.1-201ENST00000563435 692 ntBASIC13.76□□□□□ -0.21
EFNA1P20827 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.76□□□□□ -0.21
EFNA1P20827 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNA1P20827 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNA1P20827 AC027601.3-201ENST00000622907 509 ntBASIC13.76□□□□□ -0.21
EFNA1P20827 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNA1P20827 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNA1P20827 AC072061.1-201ENST00000569710 2234 ntBASIC13.76□□□□□ -0.21
EFNA1P20827 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
EFNA1P20827 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 AL445209.1-201ENST00000607269 3491 ntBASIC13.76□□□□□ -0.21
EFNA1P20827 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA1P20827 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
EFNA1P20827 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
EFNA1P20827 E2F3P2-201ENST00000447755 1422 ntBASIC13.75□□□□□ -0.21
EFNA1P20827 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.75□□□□□ -0.21
EFNA1P20827 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 CU639417.3-201ENST00000624240 1404 ntBASIC13.75□□□□□ -0.21
EFNA1P20827 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.75□□□□□ -0.21
EFNA1P20827 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.75□□□□□ -0.21
EFNA1P20827 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.75□□□□□ -0.21
EFNA1P20827 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
EFNA1P20827 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.75□□□□□ -0.21
EFNA1P20827 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.75□□□□□ -0.21
EFNA1P20827 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.75□□□□□ -0.21
EFNA1P20827 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.75□□□□□ -0.21
EFNA1P20827 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.75□□□□□ -0.21
EFNA1P20827 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.75□□□□□ -0.21
EFNA1P20827 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.75□□□□□ -0.21
EFNA1P20827 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.75□□□□□ -0.21
EFNA1P20827 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.75□□□□□ -0.21
EFNA1P20827 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.75□□□□□ -0.21
EFNA1P20827 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.75□□□□□ -0.21
EFNA1P20827 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.75□□□□□ -0.21
EFNA1P20827 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.75□□□□□ -0.21
EFNA1P20827 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.75□□□□□ -0.21
EFNA1P20827 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.75□□□□□ -0.21
EFNA1P20827 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.75□□□□□ -0.21
EFNA1P20827 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.75□□□□□ -0.21
EFNA1P20827 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
EFNA1P20827 AC073869.1-201ENST00000415574 2762 ntBASIC13.75□□□□□ -0.21
EFNA1P20827 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA1P20827 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.75□□□□□ -0.21
EFNA1P20827 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.75□□□□□ -0.21
EFNA1P20827 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.75□□□□□ -0.21
EFNA1P20827 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
EFNA1P20827 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 306.7 ms