Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LMNAP02545 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LMNAP02545 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.15■□□□□ 0.02
LMNAP02545 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LMNAP02545 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LMNAP02545 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LMNAP02545 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.14■□□□□ 0.01
LMNAP02545 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.14■□□□□ 0.01
LMNAP02545 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.14■□□□□ 0.01
LMNAP02545 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.14■□□□□ 0.01
LMNAP02545 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.14■□□□□ 0.01
LMNAP02545 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.14■□□□□ 0.01
LMNAP02545 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.14■□□□□ 0.01
LMNAP02545 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.14■□□□□ 0.01
LMNAP02545 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LMNAP02545 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.14■□□□□ 0.01
LMNAP02545 AL136309.1-201ENST00000403917 691 ntBASIC15.14■□□□□ 0.01
LMNAP02545 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.14■□□□□ 0.01
LMNAP02545 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.14■□□□□ 0.01
LMNAP02545 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.14■□□□□ 0.01
LMNAP02545 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.14■□□□□ 0.01
LMNAP02545 AL391280.1-201ENST00000506969 1062 ntBASIC15.14■□□□□ 0.01
LMNAP02545 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.14■□□□□ 0.01
LMNAP02545 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.14■□□□□ 0.01
LMNAP02545 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
LMNAP02545 COL6A4P2-202ENST00000504443 2753 ntBASIC15.14■□□□□ 0.01
LMNAP02545 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LMNAP02545 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LMNAP02545 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.14■□□□□ 0.01
LMNAP02545 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.14■□□□□ 0.01
LMNAP02545 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.14■□□□□ 0.01
LMNAP02545 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LMNAP02545 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LMNAP02545 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.14■□□□□ 0.01
LMNAP02545 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.14■□□□□ 0.01
LMNAP02545 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LMNAP02545 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LMNAP02545 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.14■□□□□ 0.01
LMNAP02545 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LMNAP02545 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
LMNAP02545 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LMNAP02545 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LMNAP02545 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LMNAP02545 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.13■□□□□ 0.01
LMNAP02545 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
LMNAP02545 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
LMNAP02545 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LMNAP02545 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 AC012362.1-201ENST00000434906 739 ntBASIC15.13■□□□□ 0.01
LMNAP02545 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.13■□□□□ 0.01
LMNAP02545 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.13■□□□□ 0.01
LMNAP02545 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.13■□□□□ 0.01
LMNAP02545 AC007787.1-201ENST00000588095 1583 ntBASIC15.13■□□□□ 0.01
LMNAP02545 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.13■□□□□ 0.01
LMNAP02545 AC242376.2-201ENST00000619355 883 ntBASIC15.13■□□□□ 0.01
LMNAP02545 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.13■□□□□ 0.01
LMNAP02545 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LMNAP02545 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.13■□□□□ 0.01
LMNAP02545 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LMNAP02545 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 PPT1-213ENST00000641319 2388 ntBASIC15.13■□□□□ 0.01
LMNAP02545 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LMNAP02545 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
LMNAP02545 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms