Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 KRT8P28-201ENST00000433288 1390 ntBASIC12.33□□□□□ -0.44
TMEM235A6NFC5 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 AL391647.1-201ENST00000395664 511 ntBASIC12.33□□□□□ -0.44
TMEM235A6NFC5 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 ARSEP1-201ENST00000420443 635 ntBASIC12.33□□□□□ -0.44
TMEM235A6NFC5 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 DUX4L27-201ENST00000554796 1261 ntBASIC12.33□□□□□ -0.44
TMEM235A6NFC5 AC005586.2-201ENST00000563946 837 ntBASIC12.33□□□□□ -0.44
TMEM235A6NFC5 KRT18P8-201ENST00000581937 1246 ntBASIC12.33□□□□□ -0.44
TMEM235A6NFC5 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM235A6NFC5 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 MESTP3-201ENST00000503460 968 ntBASIC12.32□□□□□ -0.44
TMEM235A6NFC5 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.32□□□□□ -0.44
TMEM235A6NFC5 AC104506.1-201ENST00000609247 429 ntBASIC12.32□□□□□ -0.44
TMEM235A6NFC5 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms