Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 F2-205ENST00000530231 1849 ntTSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 MRPS18AP1-201ENST00000414458 589 ntBASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 AC022137.2-201ENST00000503482 481 ntBASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 AC068587.3-201ENST00000526613 355 ntBASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 AC123567.1-201ENST00000548294 1261 ntBASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 CLUHP6-201ENST00000580789 941 ntBASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 ENPP7P14-201ENST00000621765 1040 ntBASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 AP000593.2-201ENST00000542775 1433 ntBASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 AP002761.4-201ENST00000565433 3361 ntBASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 USE1-206ENST00000595101 1776 ntTSL 2 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC10.06□□□□□ -0.8
UBE2D4Q9Y2X8 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 AL731571.1-201ENST00000617058 5428 ntBASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 RN7SKP175-201ENST00000408472 289 ntBASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 AC136604.1-202ENST00000425471 771 ntBASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 PTPA-215ENST00000432124 567 ntTSL 4 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 AL391280.1-201ENST00000506969 1062 ntBASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 AL445209.1-201ENST00000607269 3491 ntBASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms