Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 AC107375.1-201ENST00000564464 2231 ntBASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 AC010969.2-201ENST00000602458 3231 ntBASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.33□□□□□ -0.28
TMEM53Q6P2H8 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 PCDHB19P-202ENST00000625133 2914 ntBASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 RNU1-114P-201ENST00000365297 166 ntBASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 UBTFL8-201ENST00000426903 2112 ntBASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 TDH-203ENST00000531764 1110 ntBASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 MEX3B-202ENST00000558133 4333 ntBASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 LILRP1-201ENST00000444199 1370 ntBASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM53Q6P2H8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms