Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
AP1S1P61966 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP1S1P61966 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
AP1S1P61966 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP1S1P61966 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP1S1P61966 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP1S1P61966 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP1S1P61966 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP1S1P61966 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.44□□□□□ -0.1
AP1S1P61966 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.43□□□□□ -0.1
AP1S1P61966 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 BRD7P5-201ENST00000299197 1822 ntBASIC14.43□□□□□ -0.1
AP1S1P61966 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
AP1S1P61966 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 AC090643.2-201ENST00000623442 2029 ntBASIC14.43□□□□□ -0.1
AP1S1P61966 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.43□□□□□ -0.1
AP1S1P61966 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 AL662890.1-201ENST00000396818 632 ntBASIC14.43□□□□□ -0.1
AP1S1P61966 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 HMGA1P1-201ENST00000415560 1062 ntBASIC14.43□□□□□ -0.1
AP1S1P61966 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.43□□□□□ -0.1
AP1S1P61966 BCYRN1-201ENST00000418539 200 ntBASIC14.43□□□□□ -0.1
AP1S1P61966 PDIA3P2-201ENST00000428073 158 ntBASIC14.43□□□□□ -0.1
AP1S1P61966 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.43□□□□□ -0.1
AP1S1P61966 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.43□□□□□ -0.1
AP1S1P61966 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.43□□□□□ -0.1
AP1S1P61966 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.43□□□□□ -0.1
AP1S1P61966 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.43□□□□□ -0.1
AP1S1P61966 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.43□□□□□ -0.1
AP1S1P61966 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.43□□□□□ -0.1
AP1S1P61966 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.43□□□□□ -0.1
AP1S1P61966 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
AP1S1P61966 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.43□□□□□ -0.1
AP1S1P61966 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
AP1S1P61966 LINC01783-202ENST00000614408 828 ntBASIC14.43□□□□□ -0.1
AP1S1P61966 BX284668.2-205ENST00000619677 828 ntBASIC14.43□□□□□ -0.1
AP1S1P61966 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.43□□□□□ -0.1
AP1S1P61966 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
AP1S1P61966 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
AP1S1P61966 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 CICP16-201ENST00000502609 2813 ntBASIC14.43□□□□□ -0.1
AP1S1P61966 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.43□□□□□ -0.1
AP1S1P61966 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.43□□□□□ -0.1
AP1S1P61966 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
AP1S1P61966 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S1P61966 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
AP1S1P61966 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.42□□□□□ -0.1
AP1S1P61966 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.42□□□□□ -0.1
AP1S1P61966 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.42□□□□□ -0.1
AP1S1P61966 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.42□□□□□ -0.1
AP1S1P61966 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.42□□□□□ -0.1
AP1S1P61966 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
AP1S1P61966 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.42□□□□□ -0.1
AP1S1P61966 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.42□□□□□ -0.1
AP1S1P61966 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
AP1S1P61966 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
AP1S1P61966 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.42□□□□□ -0.1
AP1S1P61966 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.42□□□□□ -0.1
AP1S1P61966 RN7SL258P-201ENST00000478664 300 ntBASIC14.42□□□□□ -0.1
AP1S1P61966 NUP210P1-202ENST00000504322 710 ntBASIC14.42□□□□□ -0.1
AP1S1P61966 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.42□□□□□ -0.1
AP1S1P61966 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.42□□□□□ -0.1
AP1S1P61966 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
AP1S1P61966 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.42□□□□□ -0.1
AP1S1P61966 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
AP1S1P61966 MIR4754-201ENST00000582477 89 ntBASIC14.42□□□□□ -0.1
AP1S1P61966 AC020922.3-201ENST00000595064 547 ntBASIC14.42□□□□□ -0.1
AP1S1P61966 AL353770.1-201ENST00000614915 403 ntBASIC14.42□□□□□ -0.1
AP1S1P61966 AC091812.3-201ENST00000621362 345 ntBASIC14.42□□□□□ -0.1
AP1S1P61966 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.42□□□□□ -0.1
AP1S1P61966 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
AP1S1P61966 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
AP1S1P61966 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
AP1S1P61966 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
AP1S1P61966 RPL13AP3-202ENST00000494676 1473 ntBASIC14.42□□□□□ -0.1
AP1S1P61966 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms