Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC14.46□□□□□ -0.09
LTBRP36941 ABCC6P1-203ENST00000565566 1170 ntBASIC14.46□□□□□ -0.09
LTBRP36941 EEF1DP7-201ENST00000580496 513 ntBASIC14.46□□□□□ -0.09
LTBRP36941 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC14.46□□□□□ -0.09
LTBRP36941 AC106782.5-201ENST00000616011 337 ntBASIC14.46□□□□□ -0.09
LTBRP36941 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC14.46□□□□□ -0.09
LTBRP36941 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LTBRP36941 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC14.46□□□□□ -0.09
LTBRP36941 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTBRP36941 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTBRP36941 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC14.46□□□□□ -0.09
LTBRP36941 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTBRP36941 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTBRP36941 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTBRP36941 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTBRP36941 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LTBRP36941 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
LTBRP36941 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LTBRP36941 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LTBRP36941 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LTBRP36941 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LTBRP36941 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
LTBRP36941 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
LTBRP36941 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LTBRP36941 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LTBRP36941 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LTBRP36941 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
LTBRP36941 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 AC068760.1-201ENST00000493579 1953 ntBASIC14.45□□□□□ -0.1
LTBRP36941 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LTBRP36941 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.45□□□□□ -0.1
LTBRP36941 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.45□□□□□ -0.1
LTBRP36941 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LTBRP36941 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LTBRP36941 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
LTBRP36941 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LTBRP36941 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 FTH1P18-201ENST00000412071 549 ntBASIC14.45□□□□□ -0.1
LTBRP36941 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LTBRP36941 HNRNPA3P12-201ENST00000437410 1063 ntBASIC14.45□□□□□ -0.1
LTBRP36941 YY1P2-201ENST00000438766 948 ntBASIC14.45□□□□□ -0.1
LTBRP36941 OR4C14P-201ENST00000440929 923 ntBASIC14.45□□□□□ -0.1
LTBRP36941 KRT8P38-201ENST00000441370 1430 ntBASIC14.45□□□□□ -0.1
LTBRP36941 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC14.45□□□□□ -0.1
LTBRP36941 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC14.45□□□□□ -0.1
LTBRP36941 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LTBRP36941 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC14.45□□□□□ -0.1
LTBRP36941 SRPK2P-201ENST00000523408 1100 ntBASIC14.45□□□□□ -0.1
LTBRP36941 AC023051.2-201ENST00000541141 460 ntBASIC14.45□□□□□ -0.1
LTBRP36941 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC14.45□□□□□ -0.1
LTBRP36941 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC14.45□□□□□ -0.1
LTBRP36941 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC14.45□□□□□ -0.1
LTBRP36941 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.45□□□□□ -0.1
LTBRP36941 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC14.45□□□□□ -0.1
LTBRP36941 IFNL3P1-201ENST00000595082 501 ntBASIC14.45□□□□□ -0.1
LTBRP36941 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC14.45□□□□□ -0.1
LTBRP36941 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC14.45□□□□□ -0.1
LTBRP36941 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LTBRP36941 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LTBRP36941 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBRP36941 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LTBRP36941 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LTBRP36941 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBRP36941 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LTBRP36941 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBRP36941 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBRP36941 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LTBRP36941 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBRP36941 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LTBRP36941 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LTBRP36941 AL139158.3-201ENST00000641212 1562 ntBASIC14.44□□□□□ -0.1
LTBRP36941 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBRP36941 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LTBRP36941 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC14.44□□□□□ -0.1
LTBRP36941 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LTBRP36941 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBRP36941 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBRP36941 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LTBRP36941 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBRP36941 ASS1P1-201ENST00000402854 1237 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms