Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.57□□□□□ -0.56
UPK2O00526 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
UPK2O00526 NCLP1-201ENST00000445357 1963 ntBASIC11.57□□□□□ -0.56
UPK2O00526 C8orf49-201ENST00000525043 1968 ntBASIC11.57□□□□□ -0.56
UPK2O00526 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC11.57□□□□□ -0.56
UPK2O00526 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
UPK2O00526 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.57□□□□□ -0.56
UPK2O00526 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
UPK2O00526 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
UPK2O00526 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 LAP3P2-201ENST00000454686 1454 ntBASIC11.57□□□□□ -0.56
UPK2O00526 AC079781.5-202ENST00000641784 3743 ntBASIC11.57□□□□□ -0.56
UPK2O00526 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
UPK2O00526 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.56□□□□□ -0.56
UPK2O00526 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
UPK2O00526 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
UPK2O00526 REXO1L6P-201ENST00000603433 1515 ntBASIC11.56□□□□□ -0.56
UPK2O00526 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
UPK2O00526 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
UPK2O00526 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC11.56□□□□□ -0.56
UPK2O00526 KRT43P-201ENST00000434019 910 ntBASIC11.56□□□□□ -0.56
UPK2O00526 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC11.56□□□□□ -0.56
UPK2O00526 AL157407.1-201ENST00000435784 904 ntBASIC11.56□□□□□ -0.56
UPK2O00526 AK2P2-201ENST00000439142 405 ntBASIC11.56□□□□□ -0.56
UPK2O00526 AL645933.1-201ENST00000440087 609 ntBASIC11.56□□□□□ -0.56
UPK2O00526 ST13P19-201ENST00000442505 1124 ntBASIC11.56□□□□□ -0.56
UPK2O00526 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC11.56□□□□□ -0.56
UPK2O00526 E2F3P2-201ENST00000447755 1422 ntBASIC11.56□□□□□ -0.56
UPK2O00526 HOMER2P2-201ENST00000451621 847 ntBASIC11.56□□□□□ -0.56
UPK2O00526 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC11.56□□□□□ -0.56
UPK2O00526 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
UPK2O00526 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
UPK2O00526 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC11.56□□□□□ -0.56
UPK2O00526 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.56□□□□□ -0.56
UPK2O00526 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC11.56□□□□□ -0.56
UPK2O00526 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC11.56□□□□□ -0.56
UPK2O00526 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC11.56□□□□□ -0.56
UPK2O00526 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC11.56□□□□□ -0.56
UPK2O00526 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11.56□□□□□ -0.56
UPK2O00526 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC11.56□□□□□ -0.56
UPK2O00526 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.56□□□□□ -0.56
UPK2O00526 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
UPK2O00526 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC11.56□□□□□ -0.56
UPK2O00526 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC11.56□□□□□ -0.56
UPK2O00526 RHOXF1P1-202ENST00000635473 501 ntBASIC11.56□□□□□ -0.56
UPK2O00526 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
UPK2O00526 AL358472.5-202ENST00000641448 1267 ntBASIC11.56□□□□□ -0.56
UPK2O00526 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
UPK2O00526 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
UPK2O00526 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 AL008718.2-201ENST00000609206 1313 ntBASIC11.56□□□□□ -0.56
UPK2O00526 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
UPK2O00526 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK2O00526 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
UPK2O00526 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
UPK2O00526 AL928654.5-201ENST00000624831 2501 ntBASIC11.55□□□□□ -0.56
UPK2O00526 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK2O00526 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms