Protein–RNA interactions for Protein: Q9BYR7

KRTAP3-2, Keratin-associated protein 3-2, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-2Q9BYR7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC020916.1-201ENST00000587762 1774 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 C14orf159-202ENST00000298858 642 ntTSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 RNU1-87P-201ENST00000363727 170 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 Y_RNA.395-201ENST00000383945 109 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AL031133.1-201ENST00000406807 723 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 APCDD1L-AS1-202ENST00000424205 581 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AL451074.3-201ENST00000437709 472 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC236972.4-201ENST00000458091 963 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC105265.2-201ENST00000467189 838 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 RPS3AP14-201ENST00000483907 780 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 PLAC8-204ENST00000505406 1025 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC010587.2-201ENST00000511727 448 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 GUSBP3-202ENST00000513408 1296 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 RNU6-430P-201ENST00000517078 107 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC104986.1-201ENST00000517978 436 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 RNU6-988P-201ENST00000519081 107 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 PROSER3-206ENST00000536950 1266 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 NOP56P3-201ENST00000549457 385 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 CHCHD3P2-201ENST00000550751 639 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 DRAIC-204ENST00000558781 1222 ntTSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 OR4N3P-201ENST00000559395 818 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 DUX4L2-201ENST00000561772 1275 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 RPL17-205ENST00000579408 859 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 RPL17-212ENST00000581373 584 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC135068.4-201ENST00000622949 925 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 DUX4L6-201ENST00000626483 1275 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 DUX4L1-201ENST00000627662 1275 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 DUX4L8-201ENST00000629013 1275 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AAMDC-212ENST00000630098 542 ntTSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 DUX4L3-201ENST00000630187 1275 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 DUX4L7-201ENST00000630678 1275 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 DUX4L5-201ENST00000630834 1275 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC087633.2-202ENST00000565166 1439 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 DDX55P1-201ENST00000603334 1414 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC093525.10-201ENST00000625130 1569 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 SAYSD1-202ENST00000373249 1972 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AL445531.1-201ENST00000562653 1728 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 OR10G3-202ENST00000641040 2533 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 AC120114.2-201ENST00000567795 2272 ntBASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 ENO4-202ENST00000369207 1484 ntTSL 5 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 LYAR-202ENST00000452476 1468 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC9.28□□□□□ -0.92
KRTAP3-2Q9BYR7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
KRTAP3-2Q9BYR7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
KRTAP3-2Q9BYR7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
KRTAP3-2Q9BYR7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms