Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC041040.1-201ENST00000425197 460 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 RN7SL479P-201ENST00000472003 300 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 RN7SL477P-201ENST00000488440 286 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 FAM223B-202ENST00000598177 713 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 FAM223A-202ENST00000625204 713 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 DLX4-206ENST00000611342 1662 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 OR52X1P-201ENST00000446117 914 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 RN7SL47P-201ENST00000488710 299 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 FTH1-205ENST00000529631 507 ntTSL 4 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 RN7SL134P-201ENST00000579756 303 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AC112702.1-201ENST00000623712 366 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AC018442.1-201ENST00000421439 2061 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 KRT8P42-201ENST00000405771 1399 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 LINC02228-204ENST00000642115 2962 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AC144831.1-201ENST00000573312 2656 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 AC092384.3-202ENST00000564646 2873 ntBASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC9.28□□□□□ -0.92
ALMS1Q8TCU4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 KRT19P4-201ENST00000443208 943 ntBASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 AL161727.1-201ENST00000457409 530 ntBASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 AC079331.1-201ENST00000623200 1200 ntBASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
ALMS1Q8TCU4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 AC138035.3-201ENST00000622706 2791 ntBASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 TPT1P11-201ENST00000458482 498 ntBASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 RN7SL638P-201ENST00000494527 290 ntBASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC9.27□□□□□ -0.93
ALMS1Q8TCU4 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms