Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNA5SP491-201ENST00000362936 118 ntBASIC11.56□□□□□ -0.56
VPS13CQ709C8 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 RN7SL684P-201ENST00000465665 294 ntBASIC11.56□□□□□ -0.56
VPS13CQ709C8 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 GRAMD4P6-201ENST00000556999 244 ntBASIC11.56□□□□□ -0.56
VPS13CQ709C8 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 AL591471.1-201ENST00000621855 229 ntBASIC11.56□□□□□ -0.56
VPS13CQ709C8 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 MIR1226-201ENST00000408658 75 ntBASIC11.56□□□□□ -0.56
VPS13CQ709C8 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 YY1P2-201ENST00000438766 948 ntBASIC11.56□□□□□ -0.56
VPS13CQ709C8 UGT1A12P-201ENST00000447084 853 ntBASIC11.56□□□□□ -0.56
VPS13CQ709C8 PEBP1P3-201ENST00000455475 548 ntBASIC11.56□□□□□ -0.56
VPS13CQ709C8 BAK1P2-201ENST00000532665 631 ntBASIC11.56□□□□□ -0.56
VPS13CQ709C8 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 LINC00115-201ENST00000473798 1317 ntBASIC11.56□□□□□ -0.56
VPS13CQ709C8 AL008638.4-201ENST00000624792 1315 ntBASIC11.56□□□□□ -0.56
VPS13CQ709C8 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 PSME2P2-201ENST00000453033 700 ntBASIC11.55□□□□□ -0.56
VPS13CQ709C8 GOLGA2P8-201ENST00000505201 779 ntBASIC11.55□□□□□ -0.56
VPS13CQ709C8 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 AC132825.4-202ENST00000578792 434 ntBASIC11.55□□□□□ -0.56
VPS13CQ709C8 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 AC048382.6-201ENST00000621980 1223 ntBASIC11.55□□□□□ -0.56
VPS13CQ709C8 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 SIGLEC20P-201ENST00000595243 1311 ntBASIC11.55□□□□□ -0.56
VPS13CQ709C8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 THAP4-203ENST00000402545 833 ntTSL 5 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 AL512324.3-201ENST00000619383 882 ntBASIC11.55□□□□□ -0.56
VPS13CQ709C8 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 U3.5-201ENST00000363448 216 ntBASIC11.55□□□□□ -0.56
VPS13CQ709C8 RNU1-80P-201ENST00000459500 161 ntBASIC11.55□□□□□ -0.56
VPS13CQ709C8 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13CQ709C8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13CQ709C8 AC124319.4-201ENST00000622931 2161 ntBASIC11.54□□□□□ -0.56
VPS13CQ709C8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms