Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PCDH1Q08174 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCDH1Q08174 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.91□□□□□ -0.18
PCDH1Q08174 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.91□□□□□ -0.18
PCDH1Q08174 XBP1P1-201ENST00000436573 652 ntBASIC13.91□□□□□ -0.18
PCDH1Q08174 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.91□□□□□ -0.18
PCDH1Q08174 KRT223P-202ENST00000449164 1292 ntBASIC13.91□□□□□ -0.18
PCDH1Q08174 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.91□□□□□ -0.18
PCDH1Q08174 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.91□□□□□ -0.18
PCDH1Q08174 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.91□□□□□ -0.18
PCDH1Q08174 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCDH1Q08174 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.91□□□□□ -0.18
PCDH1Q08174 MIR4259-201ENST00000584466 101 ntBASIC13.91□□□□□ -0.18
PCDH1Q08174 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.91□□□□□ -0.18
PCDH1Q08174 MIR6805-201ENST00000615055 62 ntBASIC13.91□□□□□ -0.18
PCDH1Q08174 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCDH1Q08174 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.91□□□□□ -0.18
PCDH1Q08174 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCDH1Q08174 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.91□□□□□ -0.18
PCDH1Q08174 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.91□□□□□ -0.18
PCDH1Q08174 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.91□□□□□ -0.18
PCDH1Q08174 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.91□□□□□ -0.18
PCDH1Q08174 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCDH1Q08174 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.91□□□□□ -0.18
PCDH1Q08174 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCDH1Q08174 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PCDH1Q08174 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCDH1Q08174 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.91□□□□□ -0.18
PCDH1Q08174 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCDH1Q08174 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCDH1Q08174 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCDH1Q08174 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCDH1Q08174 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.91□□□□□ -0.18
PCDH1Q08174 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.91□□□□□ -0.18
PCDH1Q08174 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
PCDH1Q08174 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.91□□□□□ -0.18
PCDH1Q08174 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PCDH1Q08174 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCDH1Q08174 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 AC117489.1-201ENST00000625169 3217 ntBASIC13.9□□□□□ -0.18
PCDH1Q08174 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PCDH1Q08174 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PCDH1Q08174 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.9□□□□□ -0.18
PCDH1Q08174 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
PCDH1Q08174 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
PCDH1Q08174 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.9□□□□□ -0.18
PCDH1Q08174 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
PCDH1Q08174 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
PCDH1Q08174 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
PCDH1Q08174 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.9□□□□□ -0.18
PCDH1Q08174 VDAC1P1-201ENST00000439229 848 ntBASIC13.9□□□□□ -0.18
PCDH1Q08174 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.9□□□□□ -0.18
PCDH1Q08174 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PCDH1Q08174 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.9□□□□□ -0.18
PCDH1Q08174 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.9□□□□□ -0.18
PCDH1Q08174 PGAM1P5-201ENST00000548011 764 ntBASIC13.9□□□□□ -0.18
PCDH1Q08174 AL512310.5-201ENST00000551999 515 ntBASIC13.9□□□□□ -0.18
PCDH1Q08174 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.9□□□□□ -0.18
PCDH1Q08174 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.9□□□□□ -0.18
PCDH1Q08174 MIR4741-201ENST00000579822 90 ntBASIC13.9□□□□□ -0.18
PCDH1Q08174 KRT18P8-201ENST00000581937 1246 ntBASIC13.9□□□□□ -0.18
PCDH1Q08174 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.9□□□□□ -0.18
PCDH1Q08174 AL359881.2-201ENST00000602973 570 ntBASIC13.9□□□□□ -0.18
PCDH1Q08174 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
PCDH1Q08174 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.9□□□□□ -0.18
PCDH1Q08174 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.9□□□□□ -0.18
PCDH1Q08174 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.9□□□□□ -0.18
PCDH1Q08174 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 AC023794.5-201ENST00000564380 2157 ntBASIC13.9□□□□□ -0.18
PCDH1Q08174 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
PCDH1Q08174 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PCDH1Q08174 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDH1Q08174 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.9□□□□□ -0.18
PCDH1Q08174 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCDH1Q08174 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDH1Q08174 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PCDH1Q08174 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms