Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.61□□□□□ -0.23
RAE1P78406 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RAE1P78406 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.61□□□□□ -0.23
RAE1P78406 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.61□□□□□ -0.23
RAE1P78406 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 AC103592.1-201ENST00000394513 664 ntBASIC13.61□□□□□ -0.23
RAE1P78406 HMGA1P1-201ENST00000415560 1062 ntBASIC13.61□□□□□ -0.23
RAE1P78406 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.61□□□□□ -0.23
RAE1P78406 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.61□□□□□ -0.23
RAE1P78406 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.61□□□□□ -0.23
RAE1P78406 AC021723.1-201ENST00000486306 515 ntBASIC13.61□□□□□ -0.23
RAE1P78406 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.61□□□□□ -0.23
RAE1P78406 IGHV3-71-201ENST00000523324 359 ntBASIC13.61□□□□□ -0.23
RAE1P78406 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.61□□□□□ -0.23
RAE1P78406 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.61□□□□□ -0.23
RAE1P78406 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.61□□□□□ -0.23
RAE1P78406 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.61□□□□□ -0.23
RAE1P78406 KRT18P8-201ENST00000581937 1246 ntBASIC13.61□□□□□ -0.23
RAE1P78406 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.61□□□□□ -0.23
RAE1P78406 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.61□□□□□ -0.23
RAE1P78406 MIR6805-201ENST00000615055 62 ntBASIC13.61□□□□□ -0.23
RAE1P78406 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.61□□□□□ -0.23
RAE1P78406 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 AC004899.1-201ENST00000424687 1714 ntBASIC13.61□□□□□ -0.23
RAE1P78406 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RAE1P78406 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.61□□□□□ -0.23
RAE1P78406 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RAE1P78406 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAE1P78406 SHMT1P1-201ENST00000419974 1312 ntBASIC13.61□□□□□ -0.23
RAE1P78406 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RAE1P78406 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.6□□□□□ -0.23
RAE1P78406 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
RAE1P78406 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.6□□□□□ -0.23
RAE1P78406 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RAE1P78406 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.6□□□□□ -0.23
RAE1P78406 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.6□□□□□ -0.23
RAE1P78406 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.6□□□□□ -0.23
RAE1P78406 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.6□□□□□ -0.23
RAE1P78406 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.6□□□□□ -0.23
RAE1P78406 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.6□□□□□ -0.23
RAE1P78406 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.6□□□□□ -0.23
RAE1P78406 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RAE1P78406 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.6□□□□□ -0.23
RAE1P78406 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RAE1P78406 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.6□□□□□ -0.23
RAE1P78406 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RAE1P78406 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.6□□□□□ -0.23
RAE1P78406 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAE1P78406 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.59□□□□□ -0.23
RAE1P78406 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RAE1P78406 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RAE1P78406 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.59□□□□□ -0.23
RAE1P78406 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 AGAP12P-201ENST00000585227 2359 ntBASIC13.59□□□□□ -0.23
RAE1P78406 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAE1P78406 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms