Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AP003392.6-201ENST00000607709 325 ntBASIC13.65□□□□□ -0.22
GABREP78334 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
GABREP78334 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
GABREP78334 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
GABREP78334 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.64□□□□□ -0.23
GABREP78334 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.64□□□□□ -0.23
GABREP78334 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.64□□□□□ -0.23
GABREP78334 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.64□□□□□ -0.23
GABREP78334 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 AC006504.5-208ENST00000588784 2401 ntBASIC13.64□□□□□ -0.23
GABREP78334 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.64□□□□□ -0.23
GABREP78334 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
GABREP78334 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.64□□□□□ -0.23
GABREP78334 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GABREP78334 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.64□□□□□ -0.23
GABREP78334 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
GABREP78334 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.64□□□□□ -0.23
GABREP78334 AQP7P5-201ENST00000428759 1049 ntBASIC13.64□□□□□ -0.23
GABREP78334 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC13.64□□□□□ -0.23
GABREP78334 AQP7P4-201ENST00000447083 1042 ntBASIC13.64□□□□□ -0.23
GABREP78334 AQP7P2-201ENST00000453967 1041 ntBASIC13.64□□□□□ -0.23
GABREP78334 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.64□□□□□ -0.23
GABREP78334 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC13.64□□□□□ -0.23
GABREP78334 RN7SL23P-201ENST00000484055 275 ntBASIC13.64□□□□□ -0.23
GABREP78334 FAM86KP-201ENST00000509817 987 ntBASIC13.64□□□□□ -0.23
GABREP78334 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.64□□□□□ -0.23
GABREP78334 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC13.64□□□□□ -0.23
GABREP78334 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC13.64□□□□□ -0.23
GABREP78334 AC140658.4-201ENST00000561990 352 ntBASIC13.64□□□□□ -0.23
GABREP78334 AL118516.1-201ENST00000564152 670 ntBASIC13.64□□□□□ -0.23
GABREP78334 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC13.64□□□□□ -0.23
GABREP78334 PEBP1P2-201ENST00000603980 558 ntBASIC13.64□□□□□ -0.23
GABREP78334 HMGB1P24-201ENST00000611897 328 ntBASIC13.64□□□□□ -0.23
GABREP78334 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 AQP7P3-201ENST00000624547 1041 ntBASIC13.64□□□□□ -0.23
GABREP78334 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.64□□□□□ -0.23
GABREP78334 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.64□□□□□ -0.23
GABREP78334 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
GABREP78334 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.64□□□□□ -0.23
GABREP78334 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GABREP78334 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.64□□□□□ -0.23
GABREP78334 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.64□□□□□ -0.23
GABREP78334 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.64□□□□□ -0.23
GABREP78334 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.64□□□□□ -0.23
GABREP78334 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
GABREP78334 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
GABREP78334 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
GABREP78334 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABREP78334 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GABREP78334 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABREP78334 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GABREP78334 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.63□□□□□ -0.23
GABREP78334 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
GABREP78334 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.63□□□□□ -0.23
GABREP78334 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GABREP78334 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABREP78334 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GABREP78334 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABREP78334 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms