Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC16.22■□□□□ 0.19
TPM4P67936 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TPM4P67936 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TPM4P67936 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
TPM4P67936 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TPM4P67936 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
TPM4P67936 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.22■□□□□ 0.19
TPM4P67936 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 ARSEP1-201ENST00000420443 635 ntBASIC16.22■□□□□ 0.19
TPM4P67936 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.22■□□□□ 0.19
TPM4P67936 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 GNAQP1-201ENST00000444815 1067 ntBASIC16.22■□□□□ 0.19
TPM4P67936 PUDPP3-201ENST00000445368 636 ntBASIC16.22■□□□□ 0.19
TPM4P67936 ALG3P1-201ENST00000508806 1114 ntBASIC16.22■□□□□ 0.19
TPM4P67936 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.22■□□□□ 0.19
TPM4P67936 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.22■□□□□ 0.19
TPM4P67936 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.22■□□□□ 0.19
TPM4P67936 AL359711.2-201ENST00000563105 872 ntBASIC16.22■□□□□ 0.19
TPM4P67936 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.22■□□□□ 0.19
TPM4P67936 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.22■□□□□ 0.19
TPM4P67936 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.22■□□□□ 0.19
TPM4P67936 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TPM4P67936 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.22■□□□□ 0.19
TPM4P67936 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC16.22■□□□□ 0.19
TPM4P67936 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.22■□□□□ 0.19
TPM4P67936 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TPM4P67936 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC16.22■□□□□ 0.19
TPM4P67936 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM4P67936 AC004241.5-201ENST00000623870 2448 ntBASIC16.21■□□□□ 0.19
TPM4P67936 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.21■□□□□ 0.19
TPM4P67936 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
TPM4P67936 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
TPM4P67936 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC16.21■□□□□ 0.19
TPM4P67936 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TPM4P67936 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.21■□□□□ 0.19
TPM4P67936 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.21■□□□□ 0.19
TPM4P67936 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.21■□□□□ 0.19
TPM4P67936 AC093004.1-201ENST00000508850 424 ntBASIC16.21■□□□□ 0.19
TPM4P67936 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.21■□□□□ 0.19
TPM4P67936 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.21■□□□□ 0.19
TPM4P67936 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 AC133539.2-201ENST00000604757 467 ntBASIC16.21■□□□□ 0.19
TPM4P67936 AC099568.2-201ENST00000609194 695 ntBASIC16.21■□□□□ 0.19
TPM4P67936 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.21■□□□□ 0.19
TPM4P67936 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.21■□□□□ 0.19
TPM4P67936 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC16.21■□□□□ 0.19
TPM4P67936 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TPM4P67936 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TPM4P67936 AC009474.1-201ENST00000455096 1565 ntBASIC16.21■□□□□ 0.18
TPM4P67936 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.2■□□□□ 0.18
TPM4P67936 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
TPM4P67936 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.2■□□□□ 0.18
TPM4P67936 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TPM4P67936 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.2■□□□□ 0.18
TPM4P67936 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
TPM4P67936 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TPM4P67936 ACKR1-201ENST00000368121 1240 ntBASIC16.2■□□□□ 0.18
TPM4P67936 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 AL391647.1-201ENST00000395664 511 ntBASIC16.2■□□□□ 0.18
TPM4P67936 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TPM4P67936 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.2■□□□□ 0.18
TPM4P67936 AC245100.3-201ENST00000441281 285 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms