Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDK7P50613 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC15.81■□□□□ 0.12
CDK7P50613 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK7P50613 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.81■□□□□ 0.12
CDK7P50613 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.81■□□□□ 0.12
CDK7P50613 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.81■□□□□ 0.12
CDK7P50613 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK7P50613 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDK7P50613 PEBP1P2-201ENST00000603980 558 ntBASIC15.81■□□□□ 0.12
CDK7P50613 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC15.81■□□□□ 0.12
CDK7P50613 AL021707.6-201ENST00000609212 491 ntBASIC15.81■□□□□ 0.12
CDK7P50613 AC018695.6-201ENST00000614011 534 ntBASIC15.81■□□□□ 0.12
CDK7P50613 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CDK7P50613 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.81■□□□□ 0.12
CDK7P50613 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.81■□□□□ 0.12
CDK7P50613 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
CDK7P50613 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.8■□□□□ 0.12
CDK7P50613 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDK7P50613 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
CDK7P50613 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CDK7P50613 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CDK7P50613 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.8■□□□□ 0.12
CDK7P50613 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDK7P50613 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.8■□□□□ 0.12
CDK7P50613 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.8■□□□□ 0.12
CDK7P50613 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDK7P50613 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 FUCA1P1-201ENST00000374476 1351 ntBASIC15.8■□□□□ 0.12
CDK7P50613 CICP14-201ENST00000629111 2732 ntBASIC15.8■□□□□ 0.12
CDK7P50613 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDK7P50613 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
CDK7P50613 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CDK7P50613 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CDK7P50613 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CDK7P50613 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.8■□□□□ 0.12
CDK7P50613 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC15.8■□□□□ 0.12
CDK7P50613 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC15.8■□□□□ 0.12
CDK7P50613 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC15.8■□□□□ 0.12
CDK7P50613 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.8■□□□□ 0.12
CDK7P50613 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
CDK7P50613 AP005212.2-201ENST00000584979 510 ntBASIC15.8■□□□□ 0.12
CDK7P50613 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDK7P50613 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.8■□□□□ 0.12
CDK7P50613 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDK7P50613 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.8■□□□□ 0.12
CDK7P50613 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.8■□□□□ 0.12
CDK7P50613 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDK7P50613 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK7P50613 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CDK7P50613 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDK7P50613 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK7P50613 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.79■□□□□ 0.12
CDK7P50613 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK7P50613 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.79■□□□□ 0.12
CDK7P50613 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.79■□□□□ 0.12
CDK7P50613 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDK7P50613 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK7P50613 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDK7P50613 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK7P50613 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK7P50613 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK7P50613 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK7P50613 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK7P50613 ACTBP7-201ENST00000418351 1124 ntBASIC15.79■□□□□ 0.12
CDK7P50613 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.79■□□□□ 0.12
CDK7P50613 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.79■□□□□ 0.12
CDK7P50613 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC15.79■□□□□ 0.12
CDK7P50613 TREHP1-201ENST00000531328 465 ntBASIC15.79■□□□□ 0.12
CDK7P50613 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.79■□□□□ 0.12
CDK7P50613 USB1-205ENST00000561743 1135 ntTSL 3 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms