Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 AC012441.2-201ENST00000444843 739 ntBASIC12.93□□□□□ -0.34
HLA-DOBP13765 RNMTL1P1-201ENST00000454103 560 ntBASIC12.93□□□□□ -0.34
HLA-DOBP13765 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 AC089987.1-201ENST00000551654 2209 ntBASIC12.93□□□□□ -0.34
HLA-DOBP13765 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 AGAP10P-201ENST00000454844 2418 ntBASIC12.92□□□□□ -0.34
HLA-DOBP13765 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 BEND3P1-201ENST00000421591 1944 ntBASIC12.92□□□□□ -0.34
HLA-DOBP13765 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 BTBD6P1-201ENST00000412176 1267 ntBASIC12.92□□□□□ -0.34
HLA-DOBP13765 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.92□□□□□ -0.34
HLA-DOBP13765 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 FAM58BP-201ENST00000439056 645 ntBASIC12.92□□□□□ -0.34
HLA-DOBP13765 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 AC021723.1-201ENST00000486306 515 ntBASIC12.92□□□□□ -0.34
HLA-DOBP13765 AC006122.1-201ENST00000493323 440 ntBASIC12.92□□□□□ -0.34
HLA-DOBP13765 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 AL359881.3-201ENST00000602640 1721 ntBASIC12.92□□□□□ -0.34
HLA-DOBP13765 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DOBP13765 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DOBP13765 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms