Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL5A2P05997 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL5A2P05997 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL5A2P05997 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL5A2P05997 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
COL5A2P05997 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL5A2P05997 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.32■□□□□ 0.52
COL5A2P05997 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL5A2P05997 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL5A2P05997 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL5A2P05997 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL5A2P05997 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL5A2P05997 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL5A2P05997 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.32■□□□□ 0.52
COL5A2P05997 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL5A2P05997 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL5A2P05997 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL5A2P05997 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
COL5A2P05997 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL5A2P05997 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC18.32■□□□□ 0.52
COL5A2P05997 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC18.32■□□□□ 0.52
COL5A2P05997 MED15P3-201ENST00000413613 326 ntBASIC18.32■□□□□ 0.52
COL5A2P05997 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COL5A2P05997 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC18.32■□□□□ 0.52
COL5A2P05997 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC18.32■□□□□ 0.52
COL5A2P05997 AC008494.1-201ENST00000497612 796 ntBASIC18.32■□□□□ 0.52
COL5A2P05997 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC18.32■□□□□ 0.52
COL5A2P05997 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC18.32■□□□□ 0.52
COL5A2P05997 OR4A49P-201ENST00000527050 632 ntBASIC18.32■□□□□ 0.52
COL5A2P05997 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC18.32■□□□□ 0.52
COL5A2P05997 AC142086.5-202ENST00000562500 217 ntBASIC18.32■□□□□ 0.52
COL5A2P05997 INO80E-209ENST00000567254 625 ntTSL 2 BASIC18.32■□□□□ 0.52
COL5A2P05997 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC18.32■□□□□ 0.52
COL5A2P05997 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC18.32■□□□□ 0.52
COL5A2P05997 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC18.32■□□□□ 0.52
COL5A2P05997 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.32■□□□□ 0.52
COL5A2P05997 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL5A2P05997 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
COL5A2P05997 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 AC089987.1-201ENST00000551654 2209 ntBASIC18.31■□□□□ 0.52
COL5A2P05997 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.31■□□□□ 0.52
COL5A2P05997 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.31■□□□□ 0.52
COL5A2P05997 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC18.31■□□□□ 0.52
COL5A2P05997 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
COL5A2P05997 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
COL5A2P05997 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COL5A2P05997 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC18.31■□□□□ 0.52
COL5A2P05997 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
COL5A2P05997 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 FAM197Y6-201ENST00000420524 766 ntBASIC18.31■□□□□ 0.52
COL5A2P05997 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC18.31■□□□□ 0.52
COL5A2P05997 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC18.31■□□□□ 0.52
COL5A2P05997 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC18.31■□□□□ 0.52
COL5A2P05997 AC015818.1-201ENST00000451011 244 ntBASIC18.31■□□□□ 0.52
COL5A2P05997 AC233724.9-201ENST00000511694 407 ntBASIC18.31■□□□□ 0.52
COL5A2P05997 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC18.31■□□□□ 0.52
COL5A2P05997 AP000920.1-201ENST00000531824 344 ntBASIC18.31■□□□□ 0.52
COL5A2P05997 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC18.31■□□□□ 0.52
COL5A2P05997 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC18.31■□□□□ 0.52
COL5A2P05997 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC18.31■□□□□ 0.52
COL5A2P05997 MIR5091-201ENST00000578707 93 ntBASIC18.31■□□□□ 0.52
COL5A2P05997 AP001462.1-201ENST00000594089 452 ntBASIC18.31■□□□□ 0.52
COL5A2P05997 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
COL5A2P05997 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC18.31■□□□□ 0.52
COL5A2P05997 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COL5A2P05997 AC020922.4-201ENST00000621389 339 ntBASIC18.31■□□□□ 0.52
COL5A2P05997 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
COL5A2P05997 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
COL5A2P05997 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC18.31■□□□□ 0.52
COL5A2P05997 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
COL5A2P05997 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.31■□□□□ 0.52
COL5A2P05997 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL5A2P05997 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC18.3■□□□□ 0.52
COL5A2P05997 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
COL5A2P05997 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
COL5A2P05997 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
COL5A2P05997 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COL5A2P05997 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
COL5A2P05997 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
COL5A2P05997 AL513477.1-201ENST00000602865 2407 ntBASIC18.3■□□□□ 0.52
COL5A2P05997 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL5A2P05997 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms