Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 AC124283.3-201ENST00000570869 594 ntBASIC10.88□□□□□ -0.67
LTAP01374 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC10.88□□□□□ -0.67
LTAP01374 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
LTAP01374 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC10.88□□□□□ -0.67
LTAP01374 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LTAP01374 CR392039.2-201ENST00000623182 509 ntBASIC10.88□□□□□ -0.67
LTAP01374 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LTAP01374 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 PCDHA6-201ENST00000378126 3267 ntBASIC10.88□□□□□ -0.67
LTAP01374 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC10.88□□□□□ -0.67
LTAP01374 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LTAP01374 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC10.88□□□□□ -0.67
LTAP01374 AC115284.2-201ENST00000624646 2054 ntBASIC10.88□□□□□ -0.67
LTAP01374 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC10.88□□□□□ -0.67
LTAP01374 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LTAP01374 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
LTAP01374 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LTAP01374 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC10.87□□□□□ -0.67
LTAP01374 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LTAP01374 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
LTAP01374 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LTAP01374 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
LTAP01374 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC10.87□□□□□ -0.67
LTAP01374 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC10.87□□□□□ -0.67
LTAP01374 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC10.87□□□□□ -0.67
LTAP01374 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 METTL26-204ENST00000397665 558 ntTSL 2 BASIC10.87□□□□□ -0.67
LTAP01374 PGGT1BP2-201ENST00000398621 1028 ntBASIC10.87□□□□□ -0.67
LTAP01374 MEP1AP4-201ENST00000423244 1087 ntBASIC10.87□□□□□ -0.67
LTAP01374 AL442647.2-201ENST00000429864 857 ntBASIC10.87□□□□□ -0.67
LTAP01374 AC241585.1-201ENST00000433527 519 ntBASIC10.87□□□□□ -0.67
LTAP01374 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
LTAP01374 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC10.87□□□□□ -0.67
LTAP01374 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 KRT18P25-201ENST00000508931 1278 ntBASIC10.87□□□□□ -0.67
LTAP01374 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC10.87□□□□□ -0.67
LTAP01374 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC10.87□□□□□ -0.67
LTAP01374 AC023310.3-201ENST00000557027 670 ntBASIC10.87□□□□□ -0.67
LTAP01374 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LTAP01374 AC100756.1-201ENST00000562736 682 ntBASIC10.87□□□□□ -0.67
LTAP01374 AC138749.3-201ENST00000567691 622 ntBASIC10.87□□□□□ -0.67
LTAP01374 JPT2-214ENST00000569765 782 ntTSL 2 BASIC10.87□□□□□ -0.67
LTAP01374 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC10.87□□□□□ -0.67
LTAP01374 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC10.87□□□□□ -0.67
LTAP01374 AC010327.4-202ENST00000591484 748 ntBASIC10.87□□□□□ -0.67
LTAP01374 AC116165.1-201ENST00000611806 668 ntBASIC10.87□□□□□ -0.67
LTAP01374 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC10.87□□□□□ -0.67
LTAP01374 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC10.87□□□□□ -0.67
LTAP01374 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC10.87□□□□□ -0.67
LTAP01374 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
LTAP01374 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC10.87□□□□□ -0.67
LTAP01374 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC10.87□□□□□ -0.67
LTAP01374 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LTAP01374 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC10.87□□□□□ -0.67
LTAP01374 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LTAP01374 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC10.86□□□□□ -0.67
LTAP01374 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
LTAP01374 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
LTAP01374 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC10.86□□□□□ -0.67
LTAP01374 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LTAP01374 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC10.86□□□□□ -0.67
LTAP01374 TUBB4AP1-201ENST00000450755 1325 ntBASIC10.86□□□□□ -0.67
LTAP01374 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC10.86□□□□□ -0.67
LTAP01374 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LTAP01374 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LTAP01374 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms