Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AGGF1P1-201ENST00000509500 2073 ntBASIC12.89□□□□□ -0.35
CNOT4O95628 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.89□□□□□ -0.35
CNOT4O95628 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 NKAIN1P1-201ENST00000435754 582 ntBASIC12.89□□□□□ -0.35
CNOT4O95628 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.89□□□□□ -0.35
CNOT4O95628 AL133466.1-201ENST00000447582 150 ntBASIC12.89□□□□□ -0.35
CNOT4O95628 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.89□□□□□ -0.35
CNOT4O95628 AC245884.6-201ENST00000515672 1067 ntBASIC12.89□□□□□ -0.35
CNOT4O95628 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.89□□□□□ -0.35
CNOT4O95628 SNORD3B-2-202ENST00000571722 791 ntBASIC12.89□□□□□ -0.35
CNOT4O95628 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.89□□□□□ -0.35
CNOT4O95628 AC008805.1-201ENST00000590892 364 ntBASIC12.89□□□□□ -0.35
CNOT4O95628 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.89□□□□□ -0.35
CNOT4O95628 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.89□□□□□ -0.35
CNOT4O95628 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CNOT4O95628 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.89□□□□□ -0.35
CNOT4O95628 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 FAM90A7P-201ENST00000382628 1395 ntBASIC12.89□□□□□ -0.35
CNOT4O95628 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 FAM90A23P-201ENST00000400136 1395 ntBASIC12.89□□□□□ -0.35
CNOT4O95628 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CNOT4O95628 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.89□□□□□ -0.35
CNOT4O95628 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
CNOT4O95628 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CNOT4O95628 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
CNOT4O95628 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.89□□□□□ -0.35
CNOT4O95628 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.89□□□□□ -0.35
CNOT4O95628 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.89□□□□□ -0.35
CNOT4O95628 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 AL354702.1-201ENST00000442006 1960 ntBASIC12.89□□□□□ -0.35
CNOT4O95628 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
CNOT4O95628 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.88□□□□□ -0.35
CNOT4O95628 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.88□□□□□ -0.35
CNOT4O95628 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.88□□□□□ -0.35
CNOT4O95628 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.88□□□□□ -0.35
CNOT4O95628 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CNOT4O95628 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
CNOT4O95628 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.88□□□□□ -0.35
CNOT4O95628 MYADML-201ENST00000474610 2147 ntBASIC12.88□□□□□ -0.35
CNOT4O95628 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CNOT4O95628 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.88□□□□□ -0.35
CNOT4O95628 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.88□□□□□ -0.35
CNOT4O95628 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
CNOT4O95628 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CNOT4O95628 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.88□□□□□ -0.35
CNOT4O95628 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.88□□□□□ -0.35
CNOT4O95628 AC078875.1-201ENST00000431907 724 ntBASIC12.88□□□□□ -0.35
CNOT4O95628 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.88□□□□□ -0.35
CNOT4O95628 KLF2P1-201ENST00000447438 1042 ntBASIC12.88□□□□□ -0.35
CNOT4O95628 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.88□□□□□ -0.35
CNOT4O95628 AC006122.1-201ENST00000493323 440 ntBASIC12.88□□□□□ -0.35
CNOT4O95628 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.88□□□□□ -0.35
CNOT4O95628 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.88□□□□□ -0.35
CNOT4O95628 CHMP4BP1-201ENST00000556017 588 ntBASIC12.88□□□□□ -0.35
CNOT4O95628 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.88□□□□□ -0.35
CNOT4O95628 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.88□□□□□ -0.35
CNOT4O95628 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.88□□□□□ -0.35
CNOT4O95628 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.88□□□□□ -0.35
CNOT4O95628 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.88□□□□□ -0.35
CNOT4O95628 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CNOT4O95628 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms