Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 E2F3P2-201ENST00000447755 1422 ntBASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 AL157407.1-201ENST00000435784 904 ntBASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 AC234782.1-201ENST00000451950 919 ntBASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 AC018635.2-201ENST00000608625 364 ntBASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 MIR6720-201ENST00000611664 98 ntBASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 AL359881.3-201ENST00000602640 1721 ntBASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 AC117489.1-201ENST00000625169 3217 ntBASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHB1Q9Y5F3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 TUBB8P4-201ENST00000511806 1324 ntBASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 AL645933.1-201ENST00000440087 609 ntBASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 MIR3147-201ENST00000577811 66 ntBASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 MIR4783-201ENST00000580343 82 ntBASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 AP003419.4-201ENST00000616071 517 ntBASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHB1Q9Y5F3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms